Candidatus Competibacter denitrificans Run_A_D11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Candidatus Competibacteraceae

Genus

Candidatus Competibacter

Description

Candidatus Competibacter denitrificans Run_A_D11 is a unique organism characterized by having a single replicon. This trait indicates a streamlined genomic structure, which is often associated with bacteria that thrive in specific ecological niches. The organism is documented under the accession number CBTJ000000000.2, providing a reference point for genomic studies and further research. As a member of the candidate division, Candidatus Competibacter denitrificans is likely involved in important biogeochemical processes, particularly in the nitrogen cycle. Denitrification, a key process in this cycle, involves the reduction of nitrates and nitrites to nitrogen gas, thus contributing to the regulation of nitrogen levels in the environment. The presence of such organisms can be crucial in aquatic ecosystems where nitrogen compounds may accumulate, potentially leading to issues like eutrophication. The streamlined genomic architecture, represented by a single replicon, may confer advantages in its environmental adaptability and metabolic efficiency. This could allow Candidatus Competibacter denitrificans Run_A_D11 to occupy specific niches within microbial communities, possibly competing effectively with other denitrifying bacteria. In summary, Candidatus Competibacter denitrificans Run_A_D11, with its single replicon and role in denitrification, highlights the intricate connections between microbial life and nutrient cycling in ecosystems. Understanding such organisms can enhance our knowledge of microbial ecology and inform strategies for managing nitrogen levels in various habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Competibacter denitrificans Run_A_D11 genome assembly,

Gene Summary

Adenine Count

882411 bp

Thymine Count

873345 bp

Guanine Count

1151374 bp

Cytosine Count

1177739 bp

Genome Length

4084870 bp

Protein-coding Genes

4007 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine cleavage system transcriptional repressorBN873_20018Not AvailableNegative997368 - 99789819521.8
dihydrodipicolinate synthaseBN873_20019Not AvailablePositive998063 - 99893531151.8
conserved hypothetical proteinBN873_20020Not AvailablePositive998939 - 100012043460.7
enzyme in methyl-directed mismatch repair,stimulates binding of vsr and muts to heteroduplex dnaBN873_20021Not AvailablePositive1000192 - 100198865218.4
delta(2)-isopentenylpyrophosphate trna-adenosine transferaseBN873_20022Not AvailablePositive1001991 - 100296836511.6
hypothetical proteinBN873_20023Not AvailablePositive1002958 - 10031496936.67
protein hfqBN873_20024Not AvailablePositive1003356 - 10036109422.49
putative gtpase subunit of protease with nucleoside trip hydrolase domain, together with hflc-hflk involved in stability of phage lambda cii repressorBN873_20025Not AvailablePositive1003616 - 100494149105.1
modulator for hflb protease specific for phage lambda cii repressorBN873_20026Not AvailablePositive1004949 - 100635550405.7
hflc proteinBN873_20027Not AvailablePositive1006355 - 100723333251.4

Displaying genes 981 – 990 of 4071 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.