Candidatus Competibacter denitrificans Run_A_D11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Candidatus Competibacteraceae

Genus

Candidatus Competibacter

Description

Candidatus Competibacter denitrificans Run_A_D11 is a unique organism characterized by having a single replicon. This trait indicates a streamlined genomic structure, which is often associated with bacteria that thrive in specific ecological niches. The organism is documented under the accession number CBTJ000000000.2, providing a reference point for genomic studies and further research. As a member of the candidate division, Candidatus Competibacter denitrificans is likely involved in important biogeochemical processes, particularly in the nitrogen cycle. Denitrification, a key process in this cycle, involves the reduction of nitrates and nitrites to nitrogen gas, thus contributing to the regulation of nitrogen levels in the environment. The presence of such organisms can be crucial in aquatic ecosystems where nitrogen compounds may accumulate, potentially leading to issues like eutrophication. The streamlined genomic architecture, represented by a single replicon, may confer advantages in its environmental adaptability and metabolic efficiency. This could allow Candidatus Competibacter denitrificans Run_A_D11 to occupy specific niches within microbial communities, possibly competing effectively with other denitrifying bacteria. In summary, Candidatus Competibacter denitrificans Run_A_D11, with its single replicon and role in denitrification, highlights the intricate connections between microbial life and nutrient cycling in ecosystems. Understanding such organisms can enhance our knowledge of microbial ecology and inform strategies for managing nitrogen levels in various habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Competibacter denitrificans Run_A_D11 genome assembly,

Gene Summary

Adenine Count

882411 bp

Thymine Count

873345 bp

Guanine Count

1151374 bp

Cytosine Count

1177739 bp

Genome Length

4084870 bp

Protein-coding Genes

4007 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6-phosphogluconate dehydrataseBN873_460052Not AvailableNegative2601132 - 260296764585.8
gluconokinaseBN873_460053Not AvailableNegative2602967 - 260455957360.4
conserved hypothetical proteinBN873_460054Not AvailablePositive2604771 - 260529219002.7
permease of the major facilitator superfamilyBN873_460055Not AvailablePositive2605303 - 260653243552.0
sulfoxide reductase catalytic subunit yedyBN873_460056Not AvailableNegative2606588 - 260750234392.6
xanthine/uracil/vitamin c permeaseBN873_460057Not AvailablePositive2607703 - 260899244078.4
conserved membrane hypothetical proteinBN873_460058Not AvailableNegative2609005 - 260976027409.1
conserved hypothetical proteinBN873_460059Not AvailableNegative2609762 - 261085940596.2
valyl-trna synthetaseBN873_460060Not AvailableNegative2610895 - 2613660104172.0
putative amp-dependent synthetase and ligaseBN873_460061Not AvailablePositive2613849 - 261540856405.1

Displaying genes 2521 – 2530 of 4071 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.