Aliirhizobium smilacinae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Aliirhizobium

Description

Aliirhizobium smilacinae is a species of bacteria classified within the Rhizobiaceae family. This bacterium is notable for having a single replicon, which is significant for its genetic stability and replication processes. The genome of Aliirhizobium smilacinae is represented by the accession number VDMN00000000.1, indicating that its genetic information has been documented and made accessible for research purposes. As a member of the Rhizobium group, Aliirhizobium smilacinae is expected to play a role in symbiotic relationships with plants, particularly in nitrogen fixation, which is essential for plant growth and soil fertility. While specific details about its ecological interactions are not provided, the association of rhizobia with leguminous plants is well established, and it is reasonable to consider that Aliirhizobium smilacinae may contribute similarly to its ecological niche. The presence of this bacterium in specific environments suggests its potential importance in enhancing soil quality and supporting plant health. Understanding the characteristics and functions of Aliirhizobium smilacinae can provide insights into the broader impacts of rhizobia on agricultural practices and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAliirhizobium
SpeciesAliirhizobium smilacinae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliirhizobium smilacinae strain PTYR-5 ZB100030, whole genome

Gene Summary

Adenine Count

1231789 bp

Thymine Count

1230574 bp

Guanine Count

1776868 bp

Cytosine Count

1766820 bp

Genome Length

6006051 bp

Protein-coding Genes

5522 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1127 domain-containing proteinFHP24_01580Not AvailablePositive327347 - 3274905497.63
methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfoFHP24_01585Not AvailablePositive327668 - 32907750432.4
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive328629 - 329031Not Available
phytoene/squalene synthase family proteinFHP24_01595Not AvailableNegative329655 - 33050930784.3
hypothetical proteinFHP24_01600Not AvailableNegative330511 - 33089713375.2
preprotein translocase subunit yajcFHP24_01605Not AvailableNegative331011 - 33136412883.9
atp-binding proteinFHP24_01610Not AvailablePositive331548 - 33242332464.7
lysm peptidoglycan-binding domain-containing m23 family metallopeptidaseFHP24_01615Not AvailableNegative332498 - 33406053200.5
protein-l-isoaspartate(d-aspartate) o-methyltransferaseFHP24_01620Not AvailableNegative334184 - 33483723613.7
5'/3'-nucleotidase sureFHP24_01625Not AvailableNegative334834 - 33560427993.3

Displaying genes 341 – 350 of 5594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.