Aliirhizobium smilacinae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Aliirhizobium

Description

Aliirhizobium smilacinae is a species of bacteria classified within the Rhizobiaceae family. This bacterium is notable for having a single replicon, which is significant for its genetic stability and replication processes. The genome of Aliirhizobium smilacinae is represented by the accession number VDMN00000000.1, indicating that its genetic information has been documented and made accessible for research purposes. As a member of the Rhizobium group, Aliirhizobium smilacinae is expected to play a role in symbiotic relationships with plants, particularly in nitrogen fixation, which is essential for plant growth and soil fertility. While specific details about its ecological interactions are not provided, the association of rhizobia with leguminous plants is well established, and it is reasonable to consider that Aliirhizobium smilacinae may contribute similarly to its ecological niche. The presence of this bacterium in specific environments suggests its potential importance in enhancing soil quality and supporting plant health. Understanding the characteristics and functions of Aliirhizobium smilacinae can provide insights into the broader impacts of rhizobia on agricultural practices and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAliirhizobium
SpeciesAliirhizobium smilacinae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliirhizobium smilacinae strain PTYR-5 ZB100030, whole genome

Gene Summary

Adenine Count

1231789 bp

Thymine Count

1230574 bp

Guanine Count

1776868 bp

Cytosine Count

1766820 bp

Genome Length

6006051 bp

Protein-coding Genes

5522 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system rele/pare family toxinFHP24_05965Not AvailableNegative1207798 - 120811512167.5
type ii toxin-antitoxin system pard family antitoxinFHP24_05970Not AvailableNegative1208112 - 120839910809.0
glutathione s-transferase family proteinFHP24_05975Not AvailablePositive1208530 - 120917723887.6
lysr family transcriptional regulatorFHP24_05980Not AvailableNegative1209187 - 121007732342.8
hypothetical proteinFHP24_05985Not AvailablePositive1210179 - 12103948105.96
glutathione s-transferase family proteinFHP24_05990Not AvailableNegative1210398 - 121102122816.3
asparaginaseFHP24_05995Not AvailableNegative1211100 - 121210735353.3
duf3750 domain-containing proteinFHP24_06000Not AvailablePositive1212199 - 121293626557.0
duf1127 domain-containing proteinFHP24_06005Not AvailableNegative1213016 - 12131625729.92
helix-turn-helix domain-containing proteinFHP24_06010Not AvailableNegative1213815 - 121409610238.4

Displaying genes 1181 – 1190 of 5594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.