Candidatus Methanoperedens nitroreducens str. ANME-2d

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Candidatus Methanoperedentaceae

Genus

Candidatus Methanoperedens

Description

Candidatus Methanoperedens nitroreducens str. ANME-2d is a notable member of the methanogenic archaea, characterized by its unique metabolic capabilities. This organism is recognized for its ability to perform anaerobic methane oxidation coupled with the reduction of nitrite, a process that significantly contributes to the cycling of carbon and nitrogen in various environments. The strain is defined by a single replicon, which is critical for its genomic stability and function. The genomic information for Candidatus Methanoperedens nitroreducens str. ANME-2d is accessible through the accession number JMIY00000000.1, providing a valuable resource for researchers interested in understanding its genetics and metabolism. This archaeon plays a vital role in the biogeochemical processes of anaerobic environments, particularly in marine sediments and other anoxic habitats. By coupling methane oxidation with the reduction of nitrite, it helps mitigate the release of methane, a potent greenhouse gas, into the atmosphere. This unique metabolic pathway not only influences local nutrient cycles but also has broader implications for climate regulation. Overall, Candidatus Methanoperedens nitroreducens str. ANME-2d exemplifies the complex interactions within microbial communities and highlights the ecological significance of methanogenic archaea in maintaining environmental balance and mitigating climate change effects.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyCandidatus Methanoperedentaceae
GenusCandidatus Methanoperedens
SpeciesCandidatus Methanoperedens nitratireducens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Methanoperedens nitroreducens strain ANME-2d

Gene Summary

Adenine Count

905167 bp

Thymine Count

910421 bp

Guanine Count

689286 bp

Cytosine Count

692499 bp

Genome Length

3203386 bp

Protein-coding Genes

3430 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate-dependent nitrite reductase, periplasmic cytochrome c552 subunitANME2D_00342Not AvailablePositive316932 - 31788835729.6
cytochrome b subunit of formate dehydrogenaseANME2D_00343Not AvailablePositive317893 - 31864529380.0
deoxyhypusine synthaseANME2D_00344Not AvailablePositive318746 - 31987640933.1
hypothetical proteinANME2D_00345Not AvailableNegative319905 - 32017410310.4
prephenate dehydrogenaseANME2D_00346Not AvailableNegative320187 - 32148848627.5
shikimate 5-dehydrogenaseANME2D_00347Not AvailableNegative321485 - 32230028823.1
hypothetical proteinANME2D_00348Not AvailableNegative322434 - 3226679212.98
triphosphoribosyl-dephospho-coa synthetaseANME2D_00349Not AvailablePositive323036 - 32392933192.0
hypothetical proteinANME2D_00350Not AvailablePositive323926 - 32450421776.4
protein translocase subunit secy/sec61 alphaANME2D_00351Not AvailableNegative324599 - 32608653447.1

Displaying genes 351 – 360 of 3490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.