Candidatus Methanoperedens nitroreducens str. ANME-2d

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Candidatus Methanoperedentaceae

Genus

Candidatus Methanoperedens

Description

Candidatus Methanoperedens nitroreducens str. ANME-2d is a notable member of the methanogenic archaea, characterized by its unique metabolic capabilities. This organism is recognized for its ability to perform anaerobic methane oxidation coupled with the reduction of nitrite, a process that significantly contributes to the cycling of carbon and nitrogen in various environments. The strain is defined by a single replicon, which is critical for its genomic stability and function. The genomic information for Candidatus Methanoperedens nitroreducens str. ANME-2d is accessible through the accession number JMIY00000000.1, providing a valuable resource for researchers interested in understanding its genetics and metabolism. This archaeon plays a vital role in the biogeochemical processes of anaerobic environments, particularly in marine sediments and other anoxic habitats. By coupling methane oxidation with the reduction of nitrite, it helps mitigate the release of methane, a potent greenhouse gas, into the atmosphere. This unique metabolic pathway not only influences local nutrient cycles but also has broader implications for climate regulation. Overall, Candidatus Methanoperedens nitroreducens str. ANME-2d exemplifies the complex interactions within microbial communities and highlights the ecological significance of methanogenic archaea in maintaining environmental balance and mitigating climate change effects.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyCandidatus Methanoperedentaceae
GenusCandidatus Methanoperedens
SpeciesCandidatus Methanoperedens nitratireducens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Methanoperedens nitroreducens strain ANME-2d

Gene Summary

Adenine Count

905167 bp

Thymine Count

910421 bp

Guanine Count

689286 bp

Cytosine Count

692499 bp

Genome Length

3203386 bp

Protein-coding Genes

3430 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenaseANME2D_00113Not AvailablePositive108595 - 10898114267.3
hypothetical proteinANME2D_00114Not AvailableNegative109005 - 10958320863.0
coa binding protein,atp-grasp domain proteinANME2D_00115Not AvailableNegative109863 - 11127551432.6
poly(3-hydroxyalkanoate) synthetaseANME2D_00116Not AvailableNegative111291 - 11246344045.1
copper/silver-translocating p-type atpaseANME2D_00117Not AvailablePositive112662 - 11495383060.5
hypothetical proteinANME2D_00118Not AvailableNegative114956 - 11608042209.4
n-terminal double-transmembrane domain-containing proteinANME2D_00119Not AvailableNegative116077 - 11701834575.2
nodulation protein s (nods)ANME2D_00120Not AvailablePositive117191 - 11778723335.4
doubled cxxch motif-containing proteinANME2D_00121Not AvailableNegative117794 - 11907746113.4
putative phosphatase, c-terminal domain of histone macro h2a1 like proteinANME2D_00122Not AvailablePositive119182 - 11973319555.7

Displaying genes 121 – 130 of 3490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.