Candidatus Methanoperedens nitroreducens str. ANME-2d

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Candidatus Methanoperedentaceae

Genus

Candidatus Methanoperedens

Description

Candidatus Methanoperedens nitroreducens str. ANME-2d is a notable member of the methanogenic archaea, characterized by its unique metabolic capabilities. This organism is recognized for its ability to perform anaerobic methane oxidation coupled with the reduction of nitrite, a process that significantly contributes to the cycling of carbon and nitrogen in various environments. The strain is defined by a single replicon, which is critical for its genomic stability and function. The genomic information for Candidatus Methanoperedens nitroreducens str. ANME-2d is accessible through the accession number JMIY00000000.1, providing a valuable resource for researchers interested in understanding its genetics and metabolism. This archaeon plays a vital role in the biogeochemical processes of anaerobic environments, particularly in marine sediments and other anoxic habitats. By coupling methane oxidation with the reduction of nitrite, it helps mitigate the release of methane, a potent greenhouse gas, into the atmosphere. This unique metabolic pathway not only influences local nutrient cycles but also has broader implications for climate regulation. Overall, Candidatus Methanoperedens nitroreducens str. ANME-2d exemplifies the complex interactions within microbial communities and highlights the ecological significance of methanogenic archaea in maintaining environmental balance and mitigating climate change effects.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyCandidatus Methanoperedentaceae
GenusCandidatus Methanoperedens
SpeciesCandidatus Methanoperedens nitratireducens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Methanoperedens nitroreducens strain ANME-2d

Gene Summary

Adenine Count

905167 bp

Thymine Count

910421 bp

Guanine Count

689286 bp

Cytosine Count

692499 bp

Genome Length

3203386 bp

Protein-coding Genes

3430 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type transport system, involved in lipoprotein release, permease componentANME2D_00103Not AvailableNegative102413 - 10358543233.3
hypothetical proteinANME2D_00104Not AvailableNegative103582 - 10442430592.7
hypothetical proteinANME2D_00105Not AvailableNegative104481 - 1046486558.69
rubredoxinANME2D_00106Not AvailablePositive104834 - 1049925803.0
glutaredoxin-like proteinANME2D_00107Not AvailablePositive105141 - 1053869457.37
l-aminopeptidase/d-esteraseANME2D_00108Not AvailablePositive105440 - 10642033535.5
hypothetical proteinANME2D_00109Not AvailableNegative106400 - 10666610009.2
zn-dependent oxidoreductase, nadph:quinone reductaseANME2D_00110Not AvailablePositive106860 - 10780133648.6
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenaseANME2D_00111Not AvailablePositive107836 - 10822514915.2
ferredoxin-thioredoxin reductase, catalytic subunitANME2D_00112Not AvailablePositive108243 - 10859313524.6

Displaying genes 111 – 120 of 3490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.