Labilithrix luteola str. DSM 27648

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Deltaproteobacteria

Order

Polyangiales

Family

Labilitrichaceae

Genus

Labilithrix

Description

Labilithrix luteola str. DSM 27648 is a bacterial strain notable for its habitat within the rhizosphere, the region of soil surrounding plant roots. This ecological niche is crucial for plant health as it is the site of significant microbial activity, including interactions with plants that can influence nutrient uptake and overall plant growth. The strain possesses a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability and efficiency in its environment. The genomic information for Labilithrix luteola str. DSM 27648 is cataloged under the accession number NZ_CP012333.1, providing a reference point for further genetic and functional studies. Understanding the characteristics of Labilithrix luteola str. DSM 27648 enhances our knowledge of microbial diversity in the rhizosphere and its potential roles in plant-microbe interactions. Such insights can be crucial for applications in agriculture, particularly in developing strategies for sustainable plant growth and soil health management. The presence of this strain in the rhizosphere indicates its potential importance in the complex ecosystem of soil microbiomes and their contributions to plant vitality.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassDeltaproteobacteria
OrderPolyangiales
FamilyLabilitrichaceae
GenusLabilithrix
SpeciesLabilithrix luteola
StrainDSM 27648

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilithrix luteola strain DSM 27648 chromosome.

Gene Summary

Adenine Count

2067986 bp

Thymine Count

2059748 bp

Guanine Count

4028106 bp

Cytosine Count

4035626 bp

Genome Length

12191466 bp

Protein-coding Genes

10541 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseAKJ09_RS04800Not AvailableNegative1058953 - 105970227583.4
abc transporter atp-binding proteinAKJ09_RS04805Not AvailableNegative1059699 - 106072136224.4
formylglycine-generating enzyme family proteinAKJ09_RS04810Not AvailablePositive1060867 - 106184134464.1
rna polymerase sigma factorAKJ09_RS04815Not AvailablePositive1062013 - 106256721190.4
hypothetical proteinAKJ09_RS04820Not AvailablePositive1062564 - 106334028479.3
caspase family proteinAKJ09_RS04825Not AvailablePositive1063337 - 106493857384.6
hypothetical proteinAKJ09_RS04830Not AvailablePositive1064981 - 106624043882.6
duf3293 domain-containing proteinAKJ09_RS04835Not AvailableNegative1066383 - 106685017729.2
response regulator transcription factorAKJ09_RS04840Not AvailableNegative1066893 - 106766027842.7
outer membrane beta-barrel proteinAKJ09_RS04845Not AvailableNegative1067754 - 106860829896.3

Displaying genes 981 – 990 of 10617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.