Labilithrix luteola str. DSM 27648

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Deltaproteobacteria

Order

Polyangiales

Family

Labilitrichaceae

Genus

Labilithrix

Description

Labilithrix luteola str. DSM 27648 is a bacterial strain notable for its habitat within the rhizosphere, the region of soil surrounding plant roots. This ecological niche is crucial for plant health as it is the site of significant microbial activity, including interactions with plants that can influence nutrient uptake and overall plant growth. The strain possesses a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability and efficiency in its environment. The genomic information for Labilithrix luteola str. DSM 27648 is cataloged under the accession number NZ_CP012333.1, providing a reference point for further genetic and functional studies. Understanding the characteristics of Labilithrix luteola str. DSM 27648 enhances our knowledge of microbial diversity in the rhizosphere and its potential roles in plant-microbe interactions. Such insights can be crucial for applications in agriculture, particularly in developing strategies for sustainable plant growth and soil health management. The presence of this strain in the rhizosphere indicates its potential importance in the complex ecosystem of soil microbiomes and their contributions to plant vitality.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassDeltaproteobacteria
OrderPolyangiales
FamilyLabilitrichaceae
GenusLabilithrix
SpeciesLabilithrix luteola
StrainDSM 27648

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilithrix luteola strain DSM 27648 chromosome.

Gene Summary

Adenine Count

2067986 bp

Thymine Count

2059748 bp

Guanine Count

4028106 bp

Cytosine Count

4035626 bp

Genome Length

12191466 bp

Protein-coding Genes

10541 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinAKJ09_RS04995Not AvailablePositive1103487 - 110381311492.8
dj-1/pfpi family proteinAKJ09_RS05000Not AvailablePositive1104019 - 110459720928.0
integrase core domain-containing proteinAKJ09_RS05005Not AvailablePositive1104823 - 110574932925.6
integrase core domain-containing proteinAKJ09_RS55490Not AvailablePositive1105656 - 110651932077.4
thymidine phosphorylaseAKJ09_RS05015Not AvailableNegative1107255 - 110885055964.0
hypothetical proteinAKJ09_RS54685Not AvailablePositive1108893 - 110947419260.5
yafy family proteinAKJ09_RS05025Not AvailablePositive1109490 - 111064442799.6
trans-acting enoyl reductase family proteinAKJ09_RS05030Not AvailablePositive1110641 - 111188544197.3
hypothetical proteinAKJ09_RS05035Not AvailablePositive1111961 - 111262322081.9
hypothetical proteinAKJ09_RS52680Not AvailablePositive1112916 - 111324211269.2

Displaying genes 1021 – 1030 of 10617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.