Vulgatibacter incomptus

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Vulgatibacteraceae

Genus

Vulgatibacter

Description

Vulgatibacter incomptus is characterized by having a single replicon, which is indicative of its genomic structure. The strain is represented in the GenBank database with the accession number NZ_CP012332.1, providing a reference for its genetic material. The presence of a single replicon suggests a streamlined genomic organization, which is often associated with organisms that have specific ecological niches or specialized metabolic capabilities. While specific metabolic pathways or ecological roles of Vulgatibacter incomptus are not detailed in the provided information, the simplicity of having one replicon may reflect adaptations to particular environmental conditions. The genomic data associated with Vulgatibacter incomptus can be instrumental for further studies, potentially aiding in understanding its role within its ecosystem and its interactions with other microorganisms. Such insights could contribute to broader ecological knowledge, including the dynamics of microbial communities and their functions in various environments. In summary, Vulgatibacter incomptus, with its single replicon and documented genomic sequence, stands as a subject of interest within microbiological research for exploring ecological relationships and functional roles in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyVulgatibacteraceae
GenusVulgatibacter
SpeciesVulgatibacter incomptus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vulgatibacter incomptus strain DSM 27710 chromosome, complete

Gene Summary

Adenine Count

674667 bp

Thymine Count

676647 bp

Guanine Count

1497213 bp

Cytosine Count

1502026 bp

Genome Length

4350553 bp

Protein-coding Genes

3632 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha/beta hydrolaseAKJ08_RS05410Not AvailablePositive1345851 - 134701742576.4
hypothetical proteinAKJ08_RS19090Not AvailablePositive1347363 - 13475696813.81
alpha/beta fold hydrolaseAKJ08_RS05420Not AvailablePositive1347566 - 134905654322.4
alpha/beta hydrolaseAKJ08_RS05425Not AvailablePositive1349382 - 135110660411.1
alpha/beta fold hydrolaseAKJ08_RS05430Not AvailablePositive1351364 - 135302258749.0
hypothetical proteinAKJ08_RS05435Not AvailableNegative1353132 - 13533447877.41
duf6036 family nucleotidyltransferaseAKJ08_RS05440Not AvailablePositive1353345 - 135384518072.7
hypothetical proteinAKJ08_RS05445Not AvailablePositive1353901 - 135452123188.7
trna guanosine(34) transglycosylase tgtAKJ08_RS05450A1VFP3Negative1354623 - 135576242225.6
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaAKJ08_RS05455A7H9Y1Negative1355857 - 135690938076.6

Displaying genes 1091 – 1100 of 3695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

202 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 202 metabolites

Health Effects

No health effects information available for this bacterium.