Sphingomonas sp. LK11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. LK11 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for possessing three replicons, indicating a complex genomic architecture that may contribute to its adaptability in various environments. The strain has been cataloged under specific accession numbers: NZ_CP013917.1, NZ_CP013916.1, and NZ_CP013918.1, which provide a basis for further genomic studies and characterization. The presence of flagella is significant as it suggests that Sphingomonas sp. LK11 can navigate through its environment, potentially influencing its ecological interactions and its role in microbial communities. Rod-shaped bacteria, like Sphingomonas sp. LK11, often exhibit a variety of metabolic capabilities, which may allow them to exploit different substrates or adapt to diverse ecological niches. In summary, the morphological and genomic characteristics of Sphingomonas sp. LK11, particularly its rod shape, flagella presence, and multiple replicons, highlight its potential ecological versatility and adaptability. This adaptability may enhance its survival in various habitats, reflecting the broader ecological implications of such traits in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. LK11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. LK11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. LK11 chromosome, complete genome.

Gene Summary

Adenine Count

640309 bp

Thymine Count

639173 bp

Guanine Count

1250862 bp

Cytosine Count

1250727 bp

Genome Length

3781071 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAV944_RS14735Not AvailableNegative3167124 - 31673367667.53
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferaseAV944_RS14740Not AvailableNegative3167355 - 316869546696.0
universal stress proteinAV944_RS14745Not AvailablePositive3168825 - 316928015537.9
thioredoxin-disulfide reductaseAV944_RS14750Not AvailableNegative3169475 - 317044334401.9
fdhf/ydep family oxidoreductaseAV944_RS14755Not AvailablePositive3170563 - 317285183859.7
molybdenum cofactor guanylyltransferaseAV944_RS14760Not AvailablePositive3172862 - 317336817240.2
formate dehydrogenase accessory sulfurtransferase fdhdAV944_RS14765Not AvailablePositive3173628 - 317443428609.6
sensor domain-containing diguanylate cyclaseAV944_RS14770Not AvailableNegative3174439 - 317560841978.9
Trna-metNot AvailableNot AvailablePositive3175991 - 3176067Not Available
2'-5' rna ligase family proteinAV944_RS14780Not AvailableNegative3176123 - 317663518850.9

Displaying genes 2981 – 2990 of 3720 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.