Sphingomonas sp. LK11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. LK11 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for possessing three replicons, indicating a complex genomic architecture that may contribute to its adaptability in various environments. The strain has been cataloged under specific accession numbers: NZ_CP013917.1, NZ_CP013916.1, and NZ_CP013918.1, which provide a basis for further genomic studies and characterization. The presence of flagella is significant as it suggests that Sphingomonas sp. LK11 can navigate through its environment, potentially influencing its ecological interactions and its role in microbial communities. Rod-shaped bacteria, like Sphingomonas sp. LK11, often exhibit a variety of metabolic capabilities, which may allow them to exploit different substrates or adapt to diverse ecological niches. In summary, the morphological and genomic characteristics of Sphingomonas sp. LK11, particularly its rod shape, flagella presence, and multiple replicons, highlight its potential ecological versatility and adaptability. This adaptability may enhance its survival in various habitats, reflecting the broader ecological implications of such traits in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. LK11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. LK11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. LK11 chromosome, complete genome.

Gene Summary

Adenine Count

640309 bp

Thymine Count

639173 bp

Guanine Count

1250862 bp

Cytosine Count

1250727 bp

Genome Length

3781071 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps-assembly protein lptdAV944_RS11565Not AvailablePositive2473212 - 247544083056.9
peptidylprolyl isomeraseAV944_RS11570Not AvailablePositive2475454 - 247688152270.4
4-hydroxythreonine-4-phosphate dehydrogenase pdxaAV944_RS11575Not AvailablePositive2476883 - 247787834302.4
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaAV944_RS11580Not AvailablePositive2477880 - 247870429744.4
tetratricopeptide repeat proteinAV944_RS11585Not AvailableNegative2478839 - 247934217316.8
acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alphaAV944_RS11590Not AvailableNegative2479375 - 248056141431.1
imp dehydrogenaseAV944_RS11595Not AvailableNegative2480580 - 248203751273.9
spfh domain-containing proteinAV944_RS11600Not AvailablePositive2482164 - 248313835600.0
nfed family proteinAV944_RS11605Not AvailablePositive2483135 - 248359015925.4
trmh family rna methyltransferaseAV944_RS11610Not AvailableNegative2483600 - 248440029001.8

Displaying genes 2331 – 2340 of 3720 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.