Sphingomonas sp. LK11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. LK11 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for possessing three replicons, indicating a complex genomic architecture that may contribute to its adaptability in various environments. The strain has been cataloged under specific accession numbers: NZ_CP013917.1, NZ_CP013916.1, and NZ_CP013918.1, which provide a basis for further genomic studies and characterization. The presence of flagella is significant as it suggests that Sphingomonas sp. LK11 can navigate through its environment, potentially influencing its ecological interactions and its role in microbial communities. Rod-shaped bacteria, like Sphingomonas sp. LK11, often exhibit a variety of metabolic capabilities, which may allow them to exploit different substrates or adapt to diverse ecological niches. In summary, the morphological and genomic characteristics of Sphingomonas sp. LK11, particularly its rod shape, flagella presence, and multiple replicons, highlight its potential ecological versatility and adaptability. This adaptability may enhance its survival in various habitats, reflecting the broader ecological implications of such traits in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. LK11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. LK11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. LK11 chromosome, complete genome.

Gene Summary

Adenine Count

640309 bp

Thymine Count

639173 bp

Guanine Count

1250862 bp

Cytosine Count

1250727 bp

Genome Length

3781071 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidylprolyl isomeraseAV944_RS04850Not AvailableNegative1007467 - 100824927845.5
pantetheine-phosphate adenylyltransferaseAV944_RS04855Not AvailableNegative1008524 - 100902718504.8
polyprenyl synthetase family proteinAV944_RS04860Not AvailableNegative1009024 - 100992332239.6
exodeoxyribonuclease vii small subunitAV944_RS04865Not AvailableNegative1009926 - 10101658889.46
hypothetical proteinAV944_RS04870Not AvailableNegative1010213 - 10103926667.27
diguanylate cyclaseAV944_RS04875Not AvailableNegative1010389 - 101216164645.3
atp-dependent clp protease atp-binding subunit clpaAV944_RS04880Not AvailableNegative1012327 - 101464584511.6
duf1192 domain-containing proteinAV944_RS04885Not AvailableNegative1014834 - 10150287266.7
nad(p)h-quinone oxidoreductaseAV944_RS04890Not AvailablePositive1015156 - 101616335357.8
hypothetical proteinAV944_RS04895Not AvailablePositive1016234 - 101696225417.7

Displaying genes 1031 – 1040 of 3720 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.