Ochrobactrum sp. EGD-AQ16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Ochrobactrum

Description

Ochrobactrum sp. EGD-AQ16 is characterized by having a single replicon, indicating a streamlined genomic structure that may influence its adaptability and metabolic capabilities. This bacterium is cataloged under the accession number AWEU00000000.1, which provides a reference for genetic and genomic studies. The genus Ochrobactrum includes various species known for their environmental versatility, often found in soil and water, and sometimes associated with clinical settings. Although specific phenotypic characteristics of Ochrobactrum sp. EGD-AQ16 are not detailed, members of this genus typically exhibit traits that allow them to thrive in diverse habitats. The presence of a single replicon in Ochrobactrum sp. EGD-AQ16 might suggest certain ecological advantages. For instance, a simpler genomic architecture can facilitate quicker responses to environmental changes, potentially enhancing survival in fluctuating conditions. This adaptability may play a significant role in the organism's ability to colonize different environments, which is a hallmark of many Ochrobactrum species. In conclusion, while specific functional traits and ecological roles of Ochrobactrum sp. EGD-AQ16 are not detailed, its genomic configuration with a single replicon suggests potential adaptability and ecological versatility, traits that are significant in understanding its role in microbial communities and environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusOchrobactrum
SpeciesOchrobactrum sp. EGD-AQ16
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ochrobactrum sp. EGD-AQ16 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1035057 bp

Thymine Count

1019136 bp

Guanine Count

1370781 bp

Cytosine Count

1414748 bp

Genome Length

4839722 bp

Protein-coding Genes

4715 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (guanine-n1)-methyltransferaseO206_09550Not AvailableNegative3612652 - 361338326781.1
16s rrna-processing protein rimmO206_09555Not AvailableNegative3613383 - 361394920555.3
tyrosine recombinase xercO206_09560Not AvailablePositive3614122 - 361506934102.2
gumn family proteinO206_09565Not AvailablePositive3615112 - 361612537296.3
hypothetical proteinO206_09570Not AvailableNegative3616163 - 36163637470.0
hypothetical proteinO206_09575Not AvailablePositive3616778 - 361707410111.8
dihydrolipoamide dehydrogenaseO206_09580Not AvailableNegative3617171 - 361857448794.1
hypothetical proteinO206_09585Not AvailableNegative3618685 - 361922719946.5
lysine transporter lyseO206_09590Not AvailableNegative3619298 - 361993623056.9
membrane proteinO206_09595Not AvailableNegative3619978 - 362039114732.4

Displaying genes 3571 – 3580 of 4793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.