Pseudoalteromonas sp. DL-6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. DL-6 is a rod-shaped bacterium characterized by possessing two replicons, which indicates a unique genomic structure among its species. The presence of multiple replicons can contribute to genetic diversity and adaptability, potentially allowing the organism to thrive in various environments. The genome of Pseudoalteromonas sp. DL-6 is cataloged under the accession numbers NZ_CP019771.1 and NZ_CP019770.1, providing a basis for further genomic studies and comparisons within the Pseudoalteromonas genus. This bacterium belongs to a group known for its ecological roles in marine environments, often associated with bioactive compound production and interactions with other microorganisms. Given its rod shape and genomic characteristics, Pseudoalteromonas sp. DL-6 may exhibit specific physiological traits that enable it to exploit its niche effectively. The adaptability conferred by its multiple replicons may play a significant role in its ecological interactions, such as competition for resources or symbiotic relationships with marine organisms. In summary, the traits of Pseudoalteromonas sp. DL-6, particularly its rod shape and dual replicon structure, suggest a potential for ecological versatility within marine ecosystems, highlighting its importance in microbial diversity and interactions in such environments. Further research could elucidate its specific roles and contributions to marine microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. DL-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. DL-6 chromosome 1, complete sequence.

Gene Summary

Adenine Count

962433 bp

Thymine Count

964386 bp

Guanine Count

656569 bp

Cytosine Count

657007 bp

Genome Length

3240395 bp

Protein-coding Genes

2886 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system-associated protein tagfB1F84_RS17425Not AvailableNegative541124 - 54185226995.9
type vi secretion system membrane subunit tssmB1F84_RS17430Not AvailableNegative541834 - 545343133354.0
type vi secretion system protein tssl, long formB1F84_RS17435Not AvailableNegative545354 - 54663447501.1
type vi secretion system baseplate subunit tsskB1F84_RS17440Not AvailableNegative546657 - 54798548804.5
type vi secretion system lipoprotein tssjB1F84_RS17445Not AvailableNegative548002 - 54846617693.3
type vi secretion system-associated fha domain protein taghB1F84_RS17450Not AvailableNegative548482 - 54975046988.9
serine/threonine-protein kinaseB1F84_RS17455Not AvailablePositive550146 - 55211973917.9
pega domain-containing proteinB1F84_RS17460Not AvailablePositive552298 - 55264212531.1
duf1294 domain-containing proteinB1F84_RS17465Not AvailableNegative552691 - 55305013937.4
hypothetical proteinB1F84_RS17470Not AvailablePositive553102 - 55363220040.9

Displaying genes 3461 – 3470 of 3559 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.