Pseudoalteromonas sp. DL-6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. DL-6 is a rod-shaped bacterium characterized by possessing two replicons, which indicates a unique genomic structure among its species. The presence of multiple replicons can contribute to genetic diversity and adaptability, potentially allowing the organism to thrive in various environments. The genome of Pseudoalteromonas sp. DL-6 is cataloged under the accession numbers NZ_CP019771.1 and NZ_CP019770.1, providing a basis for further genomic studies and comparisons within the Pseudoalteromonas genus. This bacterium belongs to a group known for its ecological roles in marine environments, often associated with bioactive compound production and interactions with other microorganisms. Given its rod shape and genomic characteristics, Pseudoalteromonas sp. DL-6 may exhibit specific physiological traits that enable it to exploit its niche effectively. The adaptability conferred by its multiple replicons may play a significant role in its ecological interactions, such as competition for resources or symbiotic relationships with marine organisms. In summary, the traits of Pseudoalteromonas sp. DL-6, particularly its rod shape and dual replicon structure, suggest a potential for ecological versatility within marine ecosystems, highlighting its importance in microbial diversity and interactions in such environments. Further research could elucidate its specific roles and contributions to marine microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. DL-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. DL-6 chromosome 1, complete sequence.

Gene Summary

Adenine Count

962433 bp

Thymine Count

964386 bp

Guanine Count

656569 bp

Cytosine Count

657007 bp

Genome Length

3240395 bp

Protein-coding Genes

2886 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv toxin-antitoxin system abiei family antitoxinB1F84_RS11850Not AvailablePositive2536241 - 253677720208.3
nucleotidyl transferase abieii/abigii toxin family proteinB1F84_RS11855Not AvailablePositive2536767 - 253768735280.5
traa family conjugative transfer proteinB1F84_RS11860Not AvailableNegative2537753 - 253813913030.2
type iv conjugative transfer system lipoprotein travB1F84_RS11865Not AvailableNegative2538136 - 253870820395.0
trab/virb10 family proteinB1F84_RS11870Not AvailableNegative2538783 - 254007246338.4
type-f conjugative transfer system secretin trakB1F84_RS11875Not AvailableNegative2540075 - 254097132554.1
trae/trak family type iv conjugative transfer system proteinB1F84_RS11880Not AvailableNegative2540955 - 254158124066.5
type iv conjugative transfer system protein tralB1F84_RS11885Not AvailableNegative2541578 - 254185910383.9
type ii toxin-antitoxin system rele/pare family toxinB1F84_RS11890Not AvailablePositive2542040 - 254236312282.1
helix-turn-helix domain-containing proteinB1F84_RS11895Not AvailablePositive2542360 - 254263810517.7

Displaying genes 2361 – 2370 of 3559 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.