Pseudomonas taiwanensis SJ9

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas taiwanensis SJ9 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species thrives at an optimal temperature of 32°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. Notably, Pseudomonas taiwanensis SJ9 is non-spore-forming and contains a single replicon, which is significant for its genetic stability and replication process. The ability of Pseudomonas taiwanensis SJ9 to thrive in aerobic conditions suggests that it plays a role in environments where oxygen is available. Its mesophilic nature may enable it to inhabit a variety of ecological niches, including soil and water systems, where temperature fluctuations occur but generally remain within the mesophilic range. Understanding the traits of Pseudomonas taiwanensis SJ9 provides insight into its potential ecological functions. As a member of the Pseudomonas genus, this bacterium may contribute to nutrient cycling and the degradation of organic compounds in its environment, which is characteristic of many Pseudomonas species. The presence of this organism in various habitats could indicate its importance in maintaining ecological balance and supporting microbial diversity. The accession number AXUP00000000.1 serves as a reference for further genomic studies, contributing to the understanding of its biological capabilities and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas taiwanensis
StrainSJ9

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas taiwanensis SJ9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas taiwanensis SJ9


Gene Summary

Adenine Count

1195954 bp

Thymine Count

1193398 bp

Guanine Count

1927211 bp

Cytosine Count

1934089 bp

Genome Length

6253055 bp

Protein-coding Genes

5471 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Coat proteinO164_12615Not AvailableNegative2520778 - 252161130071.2
Hypothetical proteinO164_12620Not AvailableNegative2521615 - 252238827638.5
Head morphogenesis proteinO164_12625Not AvailableNegative2522502 - 252359039601.6
AttlNot AvailableNot AvailablePositive2522582 - 2522595Not Available
Portal proteinO164_12630Not AvailableNegative2523523 - 252497453121.0
Terminase large subunitO164_12635Not AvailableNegative2524974 - 252646457152.9
Terminase small subunitO164_12640Not AvailableNegative2526467 - 252708422911.2
Hypothetical proteinO164_12645Not AvailableNegative2527094 - 252752815432.2
Hypothetical proteinO164_12650Not AvailableNegative2527525 - 25276896314.7
HolinO164_12655Not AvailableNegative2527740 - 252806311828.6

Displaying genes 1 – 10 of 5601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

182 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 182 metabolites

Health Effects

No health effects information available for this bacterium.