Pseudomonas sp. EGD-AK9 str. EGD-Ak9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. EGD-AK9 str. EGD-Ak9 is characterized by having a single replicon, which is significant for its genomic organization and replication mechanics. The genome of this strain is documented under the accession number AVOF00000000.1, providing a reference point for genetic studies and comparative analyses within the Pseudomonas genus. Pseudomonas species are known for their metabolic diversity and ability to thrive in various environments, which can include soil, water, and plant surfaces. This ecological versatility often allows them to play critical roles in nutrient cycling and bioremediation processes. The specific characteristics of EGD-AK9, while not detailed in this summary, are likely to align with the general traits of Pseudomonas, such as their capacity to degrade organic pollutants and their interactions with other microorganisms. These traits highlight the ecological importance of Pseudomonas sp. EGD-AK9, as it potentially contributes to environmental health through bioremediation and nutrient cycling, reinforcing the significance of understanding its genetic makeup and metabolic capabilities. Further research on EGD-AK9 could provide insights into its specific ecological roles and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. EGD-AK9
StrainEGD-Ak9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. EGD-AK9 str. EGD-Ak9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. EGD-AK9 Contig_999, whole genome shotgun sequence.

Gene Summary

Adenine Count

889182 bp

Thymine Count

869441 bp

Guanine Count

1653332 bp

Cytosine Count

1695404 bp

Genome Length

5107430 bp

Protein-coding Genes

4907 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna methyltransferaseN878_03405Not AvailableNegative870644 - 87128824006.9
trna uridine 5-carboxymethylaminomethyl modification proteinN878_03410Not AvailableNegative871288 - 87315668059.5
trna modification gtpase trmeN878_03415Not AvailableNegative873833 - 87520049027.5
insertaseN878_03420Not AvailableNegative875336 - 87707864238.4
membrane protein insertion efficiency factorN878_03425Not AvailableNegative877081 - 8773269064.98
hypothetical proteinN878_03430Not AvailablePositive877325 - 8776159750.71
50s ribosomal protein l34N878_03435Not AvailableNegative877737 - 8778715154.49
nadph dependend quinone reductaseN878_14300Not AvailableNegative878912 - 87979631569.4
glycine/betaine abc transporter substrate-binding proteinN878_14305Not AvailableNegative879898 - 88083633569.2
arac family transcriptional regulatorN878_14310Not AvailablePositive881061 - 88200835839.1

Displaying genes 881 – 890 of 5049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.