Hymenobacter sp. DG25A

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. DG25A is a Gram-negative bacterium characterized by its rod shape. This microorganism possesses a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic information for Hymenobacter sp. DG25A can be accessed through the accession number NZ_CP012623.1. The Hymenobacter genus is known for its ecological role in diverse habitats, often thriving in soil and aquatic environments. The presence of Hymenobacter sp. DG25A in these ecosystems suggests its potential involvement in nutrient cycling and organic matter degradation. As a Gram-negative organism, it may exhibit specific biochemical pathways that enable it to interact with its surroundings effectively, possibly influencing microbial community dynamics. Overall, the traits of Hymenobacter sp. DG25A indicate its potential significance in ecological processes, particularly in environments where microbial activity plays a crucial role in maintaining ecosystem health and stability. Further studies could enhance our understanding of its specific functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. DG25A
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. DG25A chromosome, complete genome.

Gene Summary

Adenine Count

807704 bp

Thymine Count

805349 bp

Guanine Count

1080040 bp

Cytosine Count

1084043 bp

Genome Length

3777136 bp

Protein-coding Genes

3225 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm peptidoglycan-binding domain-containing proteinAM218_RS00395Not AvailableNegative99202 - 9948910226.9
hypothetical proteinAM218_RS00400Not AvailablePositive99728 - 10014115188.0
lysylphosphatidylglycerol synthase transmembrane domain-containing proteinAM218_RS00405Not AvailableNegative100236 - 10131540071.1
1-deoxy-d-xylulose-5-phosphate synthaseAM218_RS00410Not AvailablePositive101532 - 10347570961.4
t9ss type a sorting domain-containing proteinAM218_RS00415Not AvailablePositive104057 - 10542747827.2
t9ss type a sorting domain-containing proteinAM218_RS16890Not AvailablePositive106369 - 10728031785.5
t9ss type a sorting domain-containing proteinAM218_RS16460Not AvailablePositive107834 - 112090143784.0
alpha/beta fold hydrolaseAM218_RS00430Not AvailablePositive112224 - 11298228500.3
aspartate-semialdehyde dehydrogenaseAM218_RS00435Not AvailableNegative113095 - 11409336295.9
lamin tail domain-containing proteinAM218_RS00440Not AvailablePositive114228 - 11687993338.3

Displaying genes 81 – 90 of 3277 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.