Hymenobacter sp. DG25A

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. DG25A is a Gram-negative bacterium characterized by its rod shape. This microorganism possesses a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic information for Hymenobacter sp. DG25A can be accessed through the accession number NZ_CP012623.1. The Hymenobacter genus is known for its ecological role in diverse habitats, often thriving in soil and aquatic environments. The presence of Hymenobacter sp. DG25A in these ecosystems suggests its potential involvement in nutrient cycling and organic matter degradation. As a Gram-negative organism, it may exhibit specific biochemical pathways that enable it to interact with its surroundings effectively, possibly influencing microbial community dynamics. Overall, the traits of Hymenobacter sp. DG25A indicate its potential significance in ecological processes, particularly in environments where microbial activity plays a crucial role in maintaining ecosystem health and stability. Further studies could enhance our understanding of its specific functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. DG25A
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. DG25A chromosome, complete genome.

Gene Summary

Adenine Count

807704 bp

Thymine Count

805349 bp

Guanine Count

1080040 bp

Cytosine Count

1084043 bp

Genome Length

3777136 bp

Protein-coding Genes

3225 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAM218_RS00195Not AvailablePositive44358 - 4490020724.4
m28 family metallopeptidaseAM218_RS00200Not AvailableNegative45012 - 4631947658.4
vanz family proteinAM218_RS00205Not AvailableNegative46349 - 4675315292.8
glycine cleavage system protein gcvhAM218_RS00210Not AvailableNegative46765 - 4714513731.1
cell surface protein spraAM218_RS00215Not AvailableNegative47328 - 54521270347.0
holliday junction branch migration protein ruvaAM218_RS00220Not AvailableNegative54678 - 5528322128.8
nadp-dependent malic enzymeAM218_RS00225Not AvailableNegative55455 - 5772882498.0
hypothetical proteinAM218_RS00230Not AvailableNegative57885 - 5848421691.7
lysm peptidoglycan-binding domain-containing proteinAM218_RS00235Not AvailableNegative58645 - 6067275353.1
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataAM218_RS00240Not AvailableNegative60672 - 6211152326.9

Displaying genes 41 – 50 of 3277 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.