Hymenobacter sp. DG25A

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. DG25A is a Gram-negative bacterium characterized by its rod shape. This microorganism possesses a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic information for Hymenobacter sp. DG25A can be accessed through the accession number NZ_CP012623.1. The Hymenobacter genus is known for its ecological role in diverse habitats, often thriving in soil and aquatic environments. The presence of Hymenobacter sp. DG25A in these ecosystems suggests its potential involvement in nutrient cycling and organic matter degradation. As a Gram-negative organism, it may exhibit specific biochemical pathways that enable it to interact with its surroundings effectively, possibly influencing microbial community dynamics. Overall, the traits of Hymenobacter sp. DG25A indicate its potential significance in ecological processes, particularly in environments where microbial activity plays a crucial role in maintaining ecosystem health and stability. Further studies could enhance our understanding of its specific functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. DG25A
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. DG25A chromosome, complete genome.

Gene Summary

Adenine Count

807704 bp

Thymine Count

805349 bp

Guanine Count

1080040 bp

Cytosine Count

1084043 bp

Genome Length

3777136 bp

Protein-coding Genes

3225 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susd/ragb family nutrient-binding outer membrane lipoproteinAM218_RS02345Not AvailableNegative546821 - 54821550394.5
susc/raga family tonb-linked outer membrane proteinAM218_RS02350Not AvailableNegative548249 - 551404114648.0
susc/raga family tonb-linked outer membrane proteinAM218_RS02355Not AvailablePositive552094 - 555384118137.0
susd/ragb family nutrient-binding outer membrane lipoproteinAM218_RS02360Not AvailablePositive555398 - 55681651971.8
peptide chain release factor 2AM218_RS02365Not AvailableNegative556903 - 55798040816.3
branched-chain amino acid aminotransferaseAM218_RS02370Not AvailableNegative558086 - 55915039332.9
cob(i)yrinic acid a,c-diamide adenosyltransferaseAM218_RS02375Not AvailableNegative559204 - 55975220609.9
abc transporter atp-binding proteinAM218_RS02380Not AvailableNegative559851 - 56057326687.0
hypothetical proteinAM218_RS02385Not AvailableNegative560585 - 563647110677.0
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcAM218_RS02390Not AvailableNegative563648 - 56393510883.0

Displaying genes 471 – 480 of 3277 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.