Hymenobacter sp. DG25A

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. DG25A is a Gram-negative bacterium characterized by its rod shape. This microorganism possesses a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic information for Hymenobacter sp. DG25A can be accessed through the accession number NZ_CP012623.1. The Hymenobacter genus is known for its ecological role in diverse habitats, often thriving in soil and aquatic environments. The presence of Hymenobacter sp. DG25A in these ecosystems suggests its potential involvement in nutrient cycling and organic matter degradation. As a Gram-negative organism, it may exhibit specific biochemical pathways that enable it to interact with its surroundings effectively, possibly influencing microbial community dynamics. Overall, the traits of Hymenobacter sp. DG25A indicate its potential significance in ecological processes, particularly in environments where microbial activity plays a crucial role in maintaining ecosystem health and stability. Further studies could enhance our understanding of its specific functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. DG25A
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. DG25A chromosome, complete genome.

Gene Summary

Adenine Count

807704 bp

Thymine Count

805349 bp

Guanine Count

1080040 bp

Cytosine Count

1084043 bp

Genome Length

3777136 bp

Protein-coding Genes

3225 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit alphaAM218_RS01895Not AvailableNegative438785 - 442471139654.0
lysm peptidoglycan-binding domain-containing proteinAM218_RS17155Not AvailableNegative442690 - 44367334331.6
lytic transglycosylase domain-containing proteinAM218_RS01905Not AvailableNegative443703 - 44594980925.6
outer membrane beta-barrel proteinAM218_RS01910Not AvailableNegative446091 - 448919102175.0
o-methyltransferaseAM218_RS01915Not AvailableNegative449024 - 44967124354.3
pitrilysin family proteinAM218_RS01920Not AvailableNegative449682 - 45091446607.9
glycosyltransferase family 9 proteinAM218_RS01925Not AvailableNegative451075 - 45212738487.6
aminopeptidase p n-terminal domain-containing proteinAM218_RS01930Not AvailablePositive452290 - 45357949216.1
ompa family proteinAM218_RS17160Not AvailablePositive453920 - 45539853053.8
duf4252 domain-containing proteinAM218_RS01940Not AvailableNegative455481 - 45605320549.7

Displaying genes 381 – 390 of 3277 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.