Desulfofustis sp. PB-SRB1

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobulbia

Order

Desulfobulbales

Family

Desulfocapsaceae

Genus

Desulfofustis

Description

Desulfofustis sp. PB-SRB1 is a unique microbial organism characterized by a single replicon, which is significant for its genomic stability and simplicity in genetic organization. The organism is cataloged under the accession AVFQ00000000.3, indicating its recognition in scientific databases. As a member of the Desulfofustis genus, it is likely involved in sulfate-reducing processes, contributing to the biogeochemical cycling of sulfur. Sulfate-reducing bacteria (SRB) like Desulfofustis sp. are known to play crucial roles in anaerobic environments, particularly in sediments and subsurface ecosystems, where they facilitate the reduction of sulfate to sulfide. This metabolic process can influence the availability of nutrients and the dynamics of microbial communities in their habitats. The ecological significance of Desulfofustis sp. PB-SRB1 lies in its potential contributions to nutrient cycling and energy flow in anaerobic ecosystems. By participating in sulfate reduction, this organism may help maintain the balance of sulfur compounds in its environment, which can be critical for the overall health of sedimentary ecosystems. Furthermore, as a sulfate-reducing bacterium, it may also interact with other microbial populations, influencing community structure and function. Overall, Desulfofustis sp. PB-SRB1 exemplifies the intricate relationships that exist within microbial communities and the essential roles they play in ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobulbia
OrderDesulfobulbales
FamilyDesulfocapsaceae
GenusDesulfofustis
SpeciesDesulfofustis sp. PB-SRB1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Desulfofustis sp. PB-SRB1 isolate PB-SRB1-LS01-2010a

Gene Summary

Adenine Count

837152 bp

Thymine Count

839340 bp

Guanine Count

1003459 bp

Cytosine Count

1003482 bp

Genome Length

3683433 bp

Protein-coding Genes

3589 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter large permease subunitN839_0000095Not AvailableNegative20772 - 2207345635.0
trap transporter small permeaseN839_0000100Not AvailableNegative22066 - 2263821026.0
trap transporter substrate-binding proteinN839_0000105Not AvailableNegative22674 - 2365435292.1
hydantoinase b/oxoprolinase family proteinN839_0000110Not AvailablePositive23814 - 27428129828.0
transketolaseN839_0000115Not AvailablePositive27649 - 2954168318.9
duf309 domain-containing proteinN839_0000120Not AvailableNegative29542 - 3010220640.8
ybfb/yjij family mfs transporterN839_0000125Not AvailablePositive30167 - 3138442009.4
hypothetical proteinN839_0000130Not AvailableNegative31454 - 3175611178.4
Trna-sec(p)Not AvailableNot AvailablePositive31878 - 31975Not Available
glycine--trna ligase subunit alphaN839_0000140Not AvailableNegative31978 - 3285933962.3

Displaying genes 21 – 30 of 3627 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

30 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00030862-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateC34H64NO12PChemical structure of 2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateNot available
Average709.8452Da
Monoisotopic709.416613029Da

Displaying 1–10 of 30 metabolites

Health Effects

No health effects information available for this bacterium.