Desulfofustis sp. PB-SRB1

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobulbia

Order

Desulfobulbales

Family

Desulfocapsaceae

Genus

Desulfofustis

Description

Desulfofustis sp. PB-SRB1 is a unique microbial organism characterized by a single replicon, which is significant for its genomic stability and simplicity in genetic organization. The organism is cataloged under the accession AVFQ00000000.3, indicating its recognition in scientific databases. As a member of the Desulfofustis genus, it is likely involved in sulfate-reducing processes, contributing to the biogeochemical cycling of sulfur. Sulfate-reducing bacteria (SRB) like Desulfofustis sp. are known to play crucial roles in anaerobic environments, particularly in sediments and subsurface ecosystems, where they facilitate the reduction of sulfate to sulfide. This metabolic process can influence the availability of nutrients and the dynamics of microbial communities in their habitats. The ecological significance of Desulfofustis sp. PB-SRB1 lies in its potential contributions to nutrient cycling and energy flow in anaerobic ecosystems. By participating in sulfate reduction, this organism may help maintain the balance of sulfur compounds in its environment, which can be critical for the overall health of sedimentary ecosystems. Furthermore, as a sulfate-reducing bacterium, it may also interact with other microbial populations, influencing community structure and function. Overall, Desulfofustis sp. PB-SRB1 exemplifies the intricate relationships that exist within microbial communities and the essential roles they play in ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobulbia
OrderDesulfobulbales
FamilyDesulfocapsaceae
GenusDesulfofustis
SpeciesDesulfofustis sp. PB-SRB1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfofustis sp. PB-SRB1


Gene Summary

Adenine Count

837152 bp

Thymine Count

839340 bp

Guanine Count

1003459 bp

Cytosine Count

1003482 bp

Genome Length

3683433 bp

Protein-coding Genes

3589 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine dehydrogenaseN839_0000050Not AvailablePositive10198 - 1131038760.3
gntr family transcriptional regulatorN839_0000055Not AvailablePositive11391 - 1205024992.0
aldehyde dehydrogenase family proteinN839_0000060Not AvailablePositive12097 - 1365056096.5
trap transporter large permease subunitN839_0000065Not AvailablePositive13822 - 1513247382.3
trap transporter small permease subunitN839_0000070Not AvailablePositive15175 - 1568719043.3
trap transporter substrate-binding protein dctpN839_0000075Not AvailablePositive16107 - 1715037961.1
nad(p)-dependent oxidoreductaseN839_0000080Not AvailablePositive17243 - 1813931217.8
retroviral-like aspartic protease family proteinN839_0000085Not AvailablePositive18272 - 1941140564.4
Ncrna_class:otherNot AvailableNot AvailablePositive19801 - 19972Not Available
glycosyltransferase family 1 proteinN839_0000090Not AvailableNegative19784 - 2074637289.0

Displaying genes 11 – 20 of 3627 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

30 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00030862-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateC34H64NO12PChemical structure of 2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateNot available
Average709.8452Da
Monoisotopic709.416613029Da

Displaying 1–10 of 30 metabolites

Health Effects

No health effects information available for this bacterium.