Lysobacter defluvii IMMIB APB-9 = DSM 18482

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Novilysobacter

Description

Lysobacter defluvii IMMIB APB-9, also known as DSM 18482, is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species is motile, which aids in its adaptability to various environments. L. defluvii thrives optimally at a temperature of 29°C, positioning it within the mesophilic temperature range. The organism has a singular replicon, indicating a streamlined genetic structure. Importantly, L. defluvii does not form spores, which may influence its survival and reproduction strategies in fluctuating environmental conditions. The unique traits of Lysobacter defluvii suggest that it plays a significant role in its ecological niche, likely contributing to the degradation of complex organic materials. Its aerobic nature implies an involvement in processes that require oxygen, such as the breakdown of pollutants or organic matter in soil and water ecosystems. This capacity for biodegradation may be particularly valuable in bioremediation efforts, where microbial action is harnessed to mitigate environmental contamination. The accession number AVBH00000000.1 provides a reference for further genomic studies, which could enhance our understanding of its metabolic capabilities and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusNovilysobacter
SpeciesNovilysobacter defluvii
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter defluvii IMMIB APB-9 = DSM 18482 strain IMMIB APB-9

Gene Summary

Adenine Count

400809 bp

Thymine Count

401824 bp

Guanine Count

944929 bp

Cytosine Count

943824 bp

Genome Length

2691386 bp

Protein-coding Genes

2443 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl carrier proteinN791_00855Not AvailableNegative1986798 - 19870679612.27
pteridine-dependent deoxygenaseN791_00860Not AvailablePositive1987300 - 198820532582.9
membrane proteinN791_00865Not AvailablePositive1988268 - 19885108387.95
delta-aminolevulinic acid dehydrataseN791_00870Not AvailablePositive1988533 - 198952536283.1
shikimate dehydrogenaseN791_00875Not AvailablePositive1989653 - 199050730531.2
isoleucine--trna ligaseN791_12230Not AvailableNegative1990551 - 1993379104041.0
riboflavin kinaseN791_12235Not AvailableNegative1993439 - 199442835702.2
membrane proteinN791_12240Not AvailableNegative1994521 - 199612857631.9
30s ribosomal protein s20N791_12245Not AvailablePositive1996269 - 19965419931.16
peptidaseN791_04510Not AvailablePositive1997673 - 199975776238.9

Displaying genes 1791 – 1800 of 2491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.