Lysobacter defluvii IMMIB APB-9 = DSM 18482

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Novilysobacter

Description

Lysobacter defluvii IMMIB APB-9, also known as DSM 18482, is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species is motile, which aids in its adaptability to various environments. L. defluvii thrives optimally at a temperature of 29°C, positioning it within the mesophilic temperature range. The organism has a singular replicon, indicating a streamlined genetic structure. Importantly, L. defluvii does not form spores, which may influence its survival and reproduction strategies in fluctuating environmental conditions. The unique traits of Lysobacter defluvii suggest that it plays a significant role in its ecological niche, likely contributing to the degradation of complex organic materials. Its aerobic nature implies an involvement in processes that require oxygen, such as the breakdown of pollutants or organic matter in soil and water ecosystems. This capacity for biodegradation may be particularly valuable in bioremediation efforts, where microbial action is harnessed to mitigate environmental contamination. The accession number AVBH00000000.1 provides a reference for further genomic studies, which could enhance our understanding of its metabolic capabilities and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusNovilysobacter
SpeciesNovilysobacter defluvii
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter defluvii IMMIB APB-9 = DSM 18482 strain IMMIB APB-9

Gene Summary

Adenine Count

400809 bp

Thymine Count

401824 bp

Guanine Count

944929 bp

Cytosine Count

943824 bp

Genome Length

2691386 bp

Protein-coding Genes

2443 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive56 - 169Not Available
atpaseN791_00005Not AvailablePositive171 - 197362912.3
hypothetical proteinN791_00010Not AvailablePositive2066 - 243413225.3
hypothetical proteinN791_00015Not AvailablePositive2553 - 297814250.0
copper oxidaseN791_00020Not AvailablePositive3079 - 492067333.9
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive3880 - 4241Not Available
copper resistance protein copbN791_00025Not AvailablePositive4926 - 608341585.6
protein kinaseN791_00030Not AvailablePositive6107 - 662218541.9
copper amine oxidaseN791_00035Not AvailablePositive6807 - 717213043.7
ferredoxinN791_00040Not AvailablePositive7241 - 759112225.5

Displaying genes 1 – 10 of 2491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.