Methyloceanibacter caenitepidi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Methyloceanibacter

Description

Methyloceanibacter caenitepidi is a bacterium characterized by its single replicon, which is a defining trait of its genomic organization. The organism is referenced under the accession number NZ_AP014648.1, providing a basis for its genetic and taxonomic classification. This bacterium belongs to a specialized group of microorganisms capable of utilizing methane as a carbon and energy source, reflecting its potential ecological role in methane cycling. Methyloceanibacter caenitepidi may contribute to the degradation of methane in its environment, which has implications for carbon cycling and greenhouse gas mitigation. The single replicon structure indicates a simplified genomic architecture, which can be advantageous for the organism in adapting to its niche. This trait allows for efficient replication and stability in varying environmental conditions, crucial for survival in habitats where methane is available. Understanding the characteristics of Methyloceanibacter caenitepidi enhances our knowledge of microbial diversity in environments rich in methane, such as marine sediments. The ecological insights drawn from studying this bacterium underscore the importance of methanotrophic bacteria in biogeochemical processes, highlighting their role in maintaining ecological balance and influencing carbon dynamics in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusMethyloceanibacter
SpeciesMethyloceanibacter caenitepidi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methyloceanibacter caenitepidi strain Gela4 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3168 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal abc transporter substrate-binding proteinGL4_RS00165Not AvailableNegative30933 - 3195836310.9
metal abc transporter permeaseGL4_RS00170Not AvailableNegative31994 - 3286030226.1
metal abc transporter atp-binding proteinGL4_RS00175Not AvailableNegative32857 - 3361227360.0
hypothetical proteinGL4_RS17340Not AvailableNegative33648 - 338065760.23
fur family transcriptional regulatorGL4_RS00180Not AvailableNegative33833 - 3426715323.8
helix-turn-helix domain-containing proteinGL4_RS00185Not AvailableNegative34335 - 3512928736.9
mbl fold metallo-hydrolaseGL4_RS00190Not AvailablePositive35189 - 3617235643.3
o-acetyl-adp-ribose deacetylaseGL4_RS00195Not AvailablePositive36223 - 3674417283.8
cryptochrome/photolyase family proteinGL4_RS00200Not AvailablePositive36741 - 3818653254.0
glycoside hydrolase family 3 proteinGL4_RS00205Not AvailableNegative38190 - 3938042882.2

Displaying genes 221 – 230 of 3303 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.