Pseudomonas putida S13.1.2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida S13.1.2 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic mode of metabolism. This organism is facultatively anaerobic, allowing it to thrive in both aerobic and anaerobic environments. It is typically found in soil and wastewater, where it plays a significant role in the degradation of organic compounds. The bacterium is motile, possessing flagella that facilitate movement, which is advantageous for navigating its environment. Pseudomonas putida S13.1.2 has a mesophilic temperature range, suggesting it is well-suited to moderate temperature conditions commonly found in terrestrial ecosystems. This strain features a single replicon and is characterized by a double membrane structure, typical of Gram-negative bacteria. Its free-living biotic relationship indicates that it does not require a host for survival, enabling it to contribute to soil health and nutrient cycling independently. In ecological terms, Pseudomonas putida S13.1.2 is significant due to its potential role in bioremediation processes. By breaking down pollutants in wastewater and soil, this bacterium can help mitigate environmental contamination, making it a valuable organism in efforts to maintain ecosystem balance and health. The presence of this strain in such habitats emphasizes the importance of microbial diversity in ecological resilience and environmental management. The accession for this strain is NZ_CP010979.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainS13.1.2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida S13.1.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida S13.1.2 chromosome, complete genome.

Gene Summary

Adenine Count

1244490 bp

Thymine Count

1249272 bp

Guanine Count

2067416 bp

Cytosine Count

2060670 bp

Genome Length

6621848 bp

Protein-coding Genes

5708 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6957 family proteinN805_RS02735Not AvailablePositive661552 - 66197115671.2
hypothetical proteinN805_RS02740Not AvailableNegative662619 - 66317921725.0
hypothetical proteinN805_RS02745Not AvailableNegative663370 - 66420631609.1
entry exclusion lipoprotein trbkN805_RS02750Not AvailablePositive664824 - 6650729107.85
mfs transporterN805_RS02755Not AvailableNegative665439 - 66674946745.4
sdr family nad(p)-dependent oxidoreductaseN805_RS02760Not AvailableNegative666788 - 66756727531.0
sugar phosphate isomerase/epimerase family proteinN805_RS29570Not AvailableNegative667564 - 66845733484.8
lysr substrate-binding domain-containing proteinN805_RS02775Not AvailablePositive668584 - 66950433892.3
duf3077 domain-containing proteinN805_RS02780Not AvailableNegative669701 - 66997010046.1
hypothetical proteinN805_RS02785Not AvailableNegative669992 - 6702348820.87

Displaying genes 771 – 780 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.