Pseudomonas putida S13.1.2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida S13.1.2 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic mode of metabolism. This organism is facultatively anaerobic, allowing it to thrive in both aerobic and anaerobic environments. It is typically found in soil and wastewater, where it plays a significant role in the degradation of organic compounds. The bacterium is motile, possessing flagella that facilitate movement, which is advantageous for navigating its environment. Pseudomonas putida S13.1.2 has a mesophilic temperature range, suggesting it is well-suited to moderate temperature conditions commonly found in terrestrial ecosystems. This strain features a single replicon and is characterized by a double membrane structure, typical of Gram-negative bacteria. Its free-living biotic relationship indicates that it does not require a host for survival, enabling it to contribute to soil health and nutrient cycling independently. In ecological terms, Pseudomonas putida S13.1.2 is significant due to its potential role in bioremediation processes. By breaking down pollutants in wastewater and soil, this bacterium can help mitigate environmental contamination, making it a valuable organism in efforts to maintain ecosystem balance and health. The presence of this strain in such habitats emphasizes the importance of microbial diversity in ecological resilience and environmental management. The accession for this strain is NZ_CP010979.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainS13.1.2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida S13.1.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida S13.1.2 chromosome, complete genome.

Gene Summary

Adenine Count

1244490 bp

Thymine Count

1249272 bp

Guanine Count

2067416 bp

Cytosine Count

2060670 bp

Genome Length

6621848 bp

Protein-coding Genes

5708 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosyl-amp cyclohydrolaseN805_RS24240Not AvailableNegative5489635 - 549002715022.0
ubiquinone biosynthesis regulatory protein kinase ubibN805_RS24245Not AvailableNegative5490100 - 549172261557.3
ubiquinone biosynthesis accessory factor ubijN805_RS24250Not AvailableNegative5491719 - 549234222916.6
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieN805_RS24255Not AvailableNegative5492342 - 549311228460.3
polyhydroxyalkanoic acid system family proteinN805_RS24260Not AvailablePositive5493237 - 54935129953.1
duf6543 domain-containing proteinN805_RS24265Not AvailableNegative5493525 - 5498243175636.0
phasin family proteinN805_RS24270Not AvailablePositive5498469 - 549888815512.5
phasin family proteinN805_RS24275Not AvailablePositive5498899 - 549968726031.1
tetr/acrr family transcriptional regulatorN805_RS24280Not AvailableNegative5499809 - 550042323035.2
class ii poly(r)-hydroxyalkanoic acid synthaseN805_RS24285Not AvailableNegative5500437 - 550211962714.9

Displaying genes 4931 – 4940 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.