Pseudomonas putida S13.1.2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida S13.1.2 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic mode of metabolism. This organism is facultatively anaerobic, allowing it to thrive in both aerobic and anaerobic environments. It is typically found in soil and wastewater, where it plays a significant role in the degradation of organic compounds. The bacterium is motile, possessing flagella that facilitate movement, which is advantageous for navigating its environment. Pseudomonas putida S13.1.2 has a mesophilic temperature range, suggesting it is well-suited to moderate temperature conditions commonly found in terrestrial ecosystems. This strain features a single replicon and is characterized by a double membrane structure, typical of Gram-negative bacteria. Its free-living biotic relationship indicates that it does not require a host for survival, enabling it to contribute to soil health and nutrient cycling independently. In ecological terms, Pseudomonas putida S13.1.2 is significant due to its potential role in bioremediation processes. By breaking down pollutants in wastewater and soil, this bacterium can help mitigate environmental contamination, making it a valuable organism in efforts to maintain ecosystem balance and health. The presence of this strain in such habitats emphasizes the importance of microbial diversity in ecological resilience and environmental management. The accession for this strain is NZ_CP010979.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainS13.1.2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida S13.1.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida S13.1.2 chromosome, complete genome.

Gene Summary

Adenine Count

1244490 bp

Thymine Count

1249272 bp

Guanine Count

2067416 bp

Cytosine Count

2060670 bp

Genome Length

6621848 bp

Protein-coding Genes

5708 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hisfN805_RS20845Not AvailableNegative4709964 - 471073427161.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseN805_RS20850Not AvailableNegative4710745 - 471148225909.3
duf2164 domain-containing proteinN805_RS20855Not AvailableNegative4711510 - 471177010022.0
imidazole glycerol phosphate synthase subunit hishN805_RS20860Not AvailableNegative4711771 - 471240923504.0
imidazoleglycerol-phosphate dehydratase hisbN805_RS20865Not AvailableNegative4712410 - 471300321942.4
ofa family mfs transporterN805_RS20870Not AvailableNegative4713173 - 471483458512.6
asma family proteinN805_RS20875Not AvailablePositive4715203 - 471745580427.3
a/g-specific adenine glycosylaseN805_RS20880Not AvailablePositive4717452 - 471851939681.6
oxidative damage protection proteinN805_RS20885Not AvailablePositive4718516 - 471878810596.6
Trna-pheNot AvailableNot AvailablePositive4718879 - 4718954Not Available

Displaying genes 4241 – 4250 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.