Pseudomonas putida S13.1.2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida S13.1.2 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic mode of metabolism. This organism is facultatively anaerobic, allowing it to thrive in both aerobic and anaerobic environments. It is typically found in soil and wastewater, where it plays a significant role in the degradation of organic compounds. The bacterium is motile, possessing flagella that facilitate movement, which is advantageous for navigating its environment. Pseudomonas putida S13.1.2 has a mesophilic temperature range, suggesting it is well-suited to moderate temperature conditions commonly found in terrestrial ecosystems. This strain features a single replicon and is characterized by a double membrane structure, typical of Gram-negative bacteria. Its free-living biotic relationship indicates that it does not require a host for survival, enabling it to contribute to soil health and nutrient cycling independently. In ecological terms, Pseudomonas putida S13.1.2 is significant due to its potential role in bioremediation processes. By breaking down pollutants in wastewater and soil, this bacterium can help mitigate environmental contamination, making it a valuable organism in efforts to maintain ecosystem balance and health. The presence of this strain in such habitats emphasizes the importance of microbial diversity in ecological resilience and environmental management. The accession for this strain is NZ_CP010979.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainS13.1.2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida S13.1.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida S13.1.2 chromosome, complete genome.

Gene Summary

Adenine Count

1244490 bp

Thymine Count

1249272 bp

Guanine Count

2067416 bp

Cytosine Count

2060670 bp

Genome Length

6621848 bp

Protein-coding Genes

5708 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaN805_RS19410Not AvailablePositive4392974 - 439395134692.1
alpha-ketoacid dehydrogenase subunit betaN805_RS19415Not AvailablePositive4393985 - 439500736532.0
acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunitN805_RS19420Not AvailablePositive4395004 - 439611039504.3
c13 family peptidaseN805_RS19425Not AvailablePositive4396608 - 439834162832.1
oxidoreductaseN805_RS19430Not AvailablePositive4398369 - 439901323664.9
ycek/yidq family lipoproteinN805_RS19435Not AvailableNegative4399121 - 43994089570.89
flavin prenyltransferase ubixN805_RS19440Not AvailableNegative4399405 - 440003422584.4
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseN805_RS19445Not AvailableNegative4400031 - 440138048143.6
sigma-54-dependent fis family transcriptional regulatorN805_RS19450Not AvailableNegative4401447 - 440351675891.8
aldehyde dehydrogenase family proteinN805_RS19455Not AvailablePositive4403772 - 440529255240.3

Displaying genes 3951 – 3960 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.