Pseudomonas putida S13.1.2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida S13.1.2 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic mode of metabolism. This organism is facultatively anaerobic, allowing it to thrive in both aerobic and anaerobic environments. It is typically found in soil and wastewater, where it plays a significant role in the degradation of organic compounds. The bacterium is motile, possessing flagella that facilitate movement, which is advantageous for navigating its environment. Pseudomonas putida S13.1.2 has a mesophilic temperature range, suggesting it is well-suited to moderate temperature conditions commonly found in terrestrial ecosystems. This strain features a single replicon and is characterized by a double membrane structure, typical of Gram-negative bacteria. Its free-living biotic relationship indicates that it does not require a host for survival, enabling it to contribute to soil health and nutrient cycling independently. In ecological terms, Pseudomonas putida S13.1.2 is significant due to its potential role in bioremediation processes. By breaking down pollutants in wastewater and soil, this bacterium can help mitigate environmental contamination, making it a valuable organism in efforts to maintain ecosystem balance and health. The presence of this strain in such habitats emphasizes the importance of microbial diversity in ecological resilience and environmental management. The accession for this strain is NZ_CP010979.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainS13.1.2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida S13.1.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida S13.1.2 chromosome, complete genome.

Gene Summary

Adenine Count

1244490 bp

Thymine Count

1249272 bp

Guanine Count

2067416 bp

Cytosine Count

2060670 bp

Genome Length

6621848 bp

Protein-coding Genes

5708 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe-s cluster assembly protein iscxN805_RS17900Not AvailableNegative4041767 - 40419677522.87
isc system 2fe-2s type ferredoxinN805_RS17905Not AvailableNegative4041978 - 404231912439.8
fe-s protein assembly chaperone hscaN805_RS17910Not AvailableNegative4042323 - 404418565747.5
co-chaperone hscbN805_RS17915Not AvailableNegative4044228 - 404474920243.8
iron-sulfur cluster assembly protein iscaN805_RS17920Not AvailableNegative4044758 - 404508111595.7
fe-s cluster assembly scaffold iscuN805_RS17925Not AvailableNegative4045110 - 404549613856.6
iscs subfamily cysteine desulfuraseN805_RS17930Not AvailableNegative4045543 - 404675744456.9
fe-s cluster assembly transcriptional regulator iscrN805_RS17935Not AvailableNegative4046804 - 404729517874.4
serine o-acetyltransferaseN805_RS17940Not AvailableNegative4047475 - 404826028211.9
trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmjN805_RS17945Not AvailableNegative4048264 - 404901927399.2

Displaying genes 3641 – 3650 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.