Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | S13.1.2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244490 bp
Thymine Count
1249272 bp
Guanine Count
2067416 bp
Cytosine Count
2060670 bp
Genome Length
6621848 bp
Protein-coding Genes
5708 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | N805_RS08765 | Not Available | Positive | 1935592 - 1936314 | 25822.5 |
| type vi secretion system baseplate subunit tssk | N805_RS08770 | Not Available | Positive | 1936311 - 1937654 | 50132.2 |
| type ivb secretion system protein icmh/dotu | N805_RS08775 | Not Available | Positive | 1937651 - 1938367 | 26972.4 |
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | N805_RS08780 | Not Available | Positive | 1938398 - 1942195 | 138619.0 |
| type vi secretion system-associated protein tagf | N805_RS08785 | Not Available | Positive | 1942192 - 1943100 | 33483.0 |
| type vi secretion system membrane subunit tssm | N805_RS08790 | Not Available | Positive | 1943097 - 1945589 | 92942.0 |
| hcp family type vi secretion system effector | N805_RS08795 | Not Available | Positive | 1945733 - 1946251 | 18470.6 |
| type vi secretion system protein tssa | N805_RS08800 | Not Available | Positive | 1946346 - 1947431 | 39965.2 |
| excinuclease abc subunit uvra | N805_RS08805 | Not Available | Positive | 1947480 - 1949996 | 91254.7 |
| sigma-70 family rna polymerase sigma factor | N805_RS08810 | Not Available | Positive | 1950085 - 1950591 | 19222.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






