Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum sp. Eb13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
587504 bp
Thymine Count
587572 bp
Guanine Count
1221700 bp
Cytosine Count
1228729 bp
Genome Length
3626705 bp
Protein-coding Genes
3400 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DJ75_13025 | Not Available | Negative | 2632994 - 2634178 | 43492.2 |
| peptide abc transporter permease | DJ75_13030 | Not Available | Negative | 2634185 - 2635159 | 35736.6 |
| abc transporter substrate-binding protein | DJ75_13035 | Not Available | Negative | 2635193 - 2637145 | 72222.5 |
| nyn domain-containing protein | DJ75_13040 | Not Available | Positive | 2637372 - 2637869 | 18303.2 |
| succinyl-diaminopimelate desuccinylase | DJ75_13045 | Not Available | Negative | 2637888 - 2639120 | 42062.6 |
| diaminopimelate epimerase | DJ75_13050 | Not Available | Negative | 2639117 - 2640073 | 32676.9 |
| diaminopimelate decarboxylase | DJ75_13055 | Not Available | Negative | 2640070 - 2641503 | 49540.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DJ75_13060 | Not Available | Negative | 2641500 - 2642339 | 30021.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DJ75_13065 | Not Available | Negative | 2642397 - 2643197 | 27324.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DJ75_13070 | Not Available | Negative | 2643194 - 2644192 | 35595.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
