Chromobacterium amazonense str. 56AF

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium amazonense str. 56AF is an aerobic bacterium characterized by its ability to thrive in environments with ample oxygen. This organism possesses true flagella, which contribute to its motility. Notably, it has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and growth. The strain is cataloged under the accession number MTBD00000000.1, which provides a reference for further genetic and functional studies. The aerobic nature of Chromobacterium amazonense str. 56AF suggests its potential role in environments where oxygen is a limiting factor, such as in soil or aquatic ecosystems rich in organic matter. The presence of flagella enhances its ability to navigate through such environments, likely aiding in nutrient acquisition and interaction with other microbial communities. Additionally, the genomic characteristics indicated by its singular replicon could imply adaptations that allow for resilience in fluctuating ecological conditions. Understanding the traits of Chromobacterium amazonense str. 56AF may provide insights into its ecological roles, including its interactions with other microorganisms and its potential applications in bioremediation or biotechnology, where aerobic processes are crucial.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium amazonense
Strain56AF

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium amazonense strain 56AF

Gene Summary

Adenine Count

874393 bp

Thymine Count

863327 bp

Guanine Count

1401975 bp

Cytosine Count

1427012 bp

Genome Length

4566707 bp

Protein-coding Genes

4138 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail fiber protein gphBUE93_01080Not AvailableNegative223399 - 22435532905.5
Tail assembly proteinBUE93_01085Not AvailableNegative224539 - 22511721193.9
Phage tail collar proteinBUE93_01090Not AvailableNegative225128 - 22692463993.2
Trna-met;Not AvailableNot AvailablePositive225438 - 225516Not Available
Tail proteinBUE93_01095Not AvailableNegative227018 - 22759621214.4
Baseplate j proteinBUE93_01100Not AvailableNegative227593 - 22868138477.9
Putative tail proteinBUE93_01105Not AvailableNegative228681 - 22903112707.1
Trna-ala;Not AvailableNot AvailablePositive229079 - 229154Not Available
Baseplate assembly proteinBUE93_01110Not AvailableNegative229089 - 22973022387.2
Mu-like prophage tail protein gppBUE93_01115Not AvailableNegative229931 - 23098337397.4

Displaying genes 1 – 10 of 4395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.