Chromobacterium amazonense str. 56AF

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium amazonense str. 56AF is an aerobic bacterium characterized by its ability to thrive in environments with ample oxygen. This organism possesses true flagella, which contribute to its motility. Notably, it has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and growth. The strain is cataloged under the accession number MTBD00000000.1, which provides a reference for further genetic and functional studies. The aerobic nature of Chromobacterium amazonense str. 56AF suggests its potential role in environments where oxygen is a limiting factor, such as in soil or aquatic ecosystems rich in organic matter. The presence of flagella enhances its ability to navigate through such environments, likely aiding in nutrient acquisition and interaction with other microbial communities. Additionally, the genomic characteristics indicated by its singular replicon could imply adaptations that allow for resilience in fluctuating ecological conditions. Understanding the traits of Chromobacterium amazonense str. 56AF may provide insights into its ecological roles, including its interactions with other microorganisms and its potential applications in bioremediation or biotechnology, where aerobic processes are crucial.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium amazonense
Strain56AF

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium amazonense strain 56AF

Gene Summary

Adenine Count

874393 bp

Thymine Count

863327 bp

Guanine Count

1401975 bp

Cytosine Count

1427012 bp

Genome Length

4566707 bp

Protein-coding Genes

4138 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail/dna circulation proteinBUE93_01120Not AvailableNegative230967 - 23225945920.7
Trna-ala;Not AvailableNot AvailablePositive231775 - 231850Not Available
Trna-glu;Not AvailableNot AvailablePositive231871 - 231946Not Available
Trna-ala;Not AvailableNot AvailablePositive231956 - 232031Not Available
Baseplate hub subunit and tail lysozymeBUE93_01125Not AvailableNegative232259 - 23451779536.9
Tail tube proteinBUE93_01130Not AvailableNegative234587 - 23496113545.3
Tail sheath protein gplBUE93_01135Not AvailableNegative235028 - 23645249470.3
Mu-like prophage protein gp37BUE93_01140Not AvailableNegative236530 - 23721924582.3
Hypothetical proteinBUE93_01145Not AvailableNegative237293 - 2375087680.55
Dksa-like zinc finger domain containing proteinBUE93_01150Not AvailableNegative237519 - 2377167355.41

Displaying genes 11 – 20 of 4395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.