Neotamlana nanhaiensis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Neotamlana

Description

Neotamlana nanhaiensis is characterized by having a single replicon, which is a notable trait for its genomic structure. It is cataloged under the accession number JTDV00000000.1, indicating that it has been sequenced and documented in a scientific database. This organism's single replicon suggests a streamlined genomic architecture, which may have implications for its replication and genetic stability. The presence of only one replicon can often be associated with reduced complexity in regulatory mechanisms and may influence the organism's adaptability to its environment. In an ecological context, the genomic traits of Neotamlana nanhaiensis could provide insights into its metabolic capabilities and ecological roles within its habitat. The simplicity of having a singular replicon might allow for rapid responses to environmental changes, potentially enabling it to thrive in specific niches. Understanding the genetic makeup of Neotamlana nanhaiensis can contribute to our knowledge of microbial diversity and the evolutionary strategies of microorganisms in various ecological settings.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNeotamlana
SpeciesNeotamlana nanhaiensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tamlana nanhaiensis strain FHC16 contig41, whole genome shotgun

Gene Summary

Adenine Count

1321169 bp

Thymine Count

1324210 bp

Guanine Count

676842 bp

Cytosine Count

698598 bp

Genome Length

4020819 bp

Protein-coding Genes

3202 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPK35_05655Not AvailablePositive1442171 - 144290528923.9
abc transporter atp-binding proteinPK35_05660Q58283Negative1442912 - 144370629424.1
iron abc transporterPK35_05665Q56992Negative1443760 - 144479136951.0
abc transporter substrate-binding proteinPK35_05670Q58288Negative1444792 - 144593142997.3
abc transporter substrate-binding proteinPK35_05675Not AvailablePositive1446016 - 144695434929.9
tonb-dependent receptorPK35_05680Not AvailablePositive1447262 - 144913070655.6
cell surface proteinPK35_05685Not AvailablePositive1449134 - 145020438496.5
atp-binding domain-containing proteinPK35_05690Not AvailableNegative1450400 - 145111027092.3
hypothetical proteinPK35_05695Not AvailableNegative1451120 - 145256853155.5
rna polymerase sigma-70 factorPK35_05700Not AvailablePositive1452903 - 145341219945.1

Displaying genes 1061 – 1070 of 3246 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

167 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 167 metabolites

Health Effects

No health effects information available for this bacterium.