Lactococcus garvieae TRF1

Coccifacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Lactococcus

Description

Lactococcus garvieae TRF1 is a Gram-positive, facultative anaerobic bacterium characterized by its cocci shape. This organism possesses true flagella, which may contribute to its motility in various environments. L. garvieae TRF1 has a single replicon, indicating a streamlined genomic architecture that may facilitate its adaptability in different ecological niches. The presence of flagella in L. garvieae TRF1 is noteworthy as it distinguishes this species from other Lactococcus species that typically lack flagella. This feature may enhance its ability to colonize specific environments, potentially influencing its ecological interactions with other microorganisms and its host organisms. Understanding the traits of L. garvieae TRF1 can provide insights into its biological roles within microbial communities. As a facultative anaerobe, this bacterium can thrive in both aerobic and anaerobic conditions, suggesting its versatility in exploiting various substrates for growth. This adaptability may allow L. garvieae TRF1 to play a significant role in fermentative processes, contributing to nutrient cycling in its environments. The genomic data associated with L. garvieae TRF1, as indicated by its accession number AVFE00000000.1, could further elucidate its metabolic capabilities and potential applications in biotechnology or health-related fields. Overall, the unique traits of Lactococcus garvieae TRF1 underscore its potential ecological significance and adaptability in diverse habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusLactococcus
SpeciesLactococcus garvieae
StrainTRF1

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactococcus garvieae TRF1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactococcus garvieae TRF1 Contig_112, whole genome shotgun

Gene Summary

Adenine Count

682770 bp

Thymine Count

673391 bp

Guanine Count

428116 bp

Cytosine Count

420131 bp

Genome Length

2204914 bp

Protein-coding Genes

2243 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts sugar transporter subunit iiaN568_0111275Not AvailablePositive2053116 - 205360116913.4
pts beta-glucoside transporter subunit iiabcN568_0111280Not AvailablePositive2053614 - 205496347955.9
2-oxoisovalerate dehydrogenase subunit betaN568_0111290Not AvailableNegative2055210 - 205619035285.2
pyruvate dehydrogenase e1 subunit alphaN568_0111295Not AvailableNegative2056193 - 205731741326.9
lipoate-protein ligase aN568_0111300Not AvailableNegative2057350 - 205834537396.7
glycerophosphodiester phosphodiesteraseN568_0111305Not AvailableNegative2058550 - 205932029531.7
hd family metal-dependent phosphohydrolaseN568_0111310Not AvailableNegative2059332 - 205997024378.9
tryptophanyl-trna synthaseN568_0111315Not AvailableNegative2059988 - 206101938047.6
peroxiredoxinN568_0111320Not AvailablePositive2061435 - 206187515501.1
50s ribosomal protein l27N568_0111335Not AvailableNegative2064738 - 206502210012.0

Displaying genes 2121 – 2130 of 2311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.