Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter sp. DG15C |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1054754 bp
Thymine Count
1049990 bp
Guanine Count
1019561 bp
Cytosine Count
1019433 bp
Genome Length
4143738 bp
Protein-coding Genes
3485 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4271 domain-containing protein | TH61_RS04920 | Not Available | Negative | 1176383 - 1177510 | 42986.7 |
| mray family glycosyltransferase | TH61_RS04925 | Not Available | Negative | 1177514 - 1178554 | 37891.2 |
| hypothetical protein | TH61_RS04930 | Not Available | Negative | 1178629 - 1179033 | 15225.1 |
| lipoyl(octanoyl) transferase lipb | TH61_RS04935 | Not Available | Negative | 1179017 - 1179751 | 28055.8 |
| yran family protein | TH61_RS04940 | Not Available | Positive | 1179879 - 1180232 | 13858.4 |
| toxin-antitoxin system ywqk family antitoxin | TH61_RS04945 | Not Available | Negative | 1180287 - 1181192 | 35110.1 |
| septal ring lytic transglycosylase rlpa family protein | TH61_RS04950 | Not Available | Negative | 1181442 - 1182182 | 26697.3 |
| duf72 domain-containing protein | TH61_RS04955 | Not Available | Positive | 1182594 - 1183502 | 34961.2 |
| pas domain-containing sensor histidine kinase | TH61_RS04960 | Not Available | Negative | 1183589 - 1184899 | 49503.5 |
| sigma-54 dependent transcriptional regulator | TH61_RS04965 | Not Available | Negative | 1184883 - 1186265 | 51201.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
