Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter sp. DG15C |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1054754 bp
Thymine Count
1049990 bp
Guanine Count
1019561 bp
Cytosine Count
1019433 bp
Genome Length
4143738 bp
Protein-coding Genes
3485 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | TH61_RS03870 | Not Available | Negative | 926376 - 927869 | 56597.8 |
| endonuclease/exonuclease/phosphatase family protein | TH61_RS03875 | Not Available | Negative | 928012 - 929124 | 42466.5 |
| twin-arginine translocase tata/tate family subunit | TH61_RS18475 | Not Available | Positive | 929361 - 929720 | 12747.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | TH61_RS03885 | Not Available | Positive | 929723 - 931159 | 52025.7 |
| lytic transglycosylase domain-containing protein | TH61_RS03890 | Not Available | Positive | 931159 - 932715 | 57510.9 |
| nadp-dependent malic enzyme | TH61_RS03895 | Not Available | Positive | 932931 - 935201 | 83078.2 |
| holliday junction branch migration protein ruva | TH61_RS03900 | Not Available | Positive | 935366 - 935956 | 21490.1 |
| cell surface protein spra | TH61_RS03905 | Not Available | Positive | 935975 - 943135 | 270144.0 |
| glycine cleavage system protein gcvh | TH61_RS03910 | Not Available | Positive | 943194 - 943574 | 13964.3 |
| vanz family protein | TH61_RS03915 | Not Available | Positive | 943586 - 943957 | 13509.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
