Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter sp. DG15C |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1054754 bp
Thymine Count
1049990 bp
Guanine Count
1019561 bp
Cytosine Count
1019433 bp
Genome Length
4143738 bp
Protein-coding Genes
3485 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | TH61_RS03820 | Not Available | Positive | 913413 - 914024 | 22671.4 |
| duf2339 domain-containing protein | TH61_RS03825 | Not Available | Positive | 914244 - 916664 | 90169.5 |
| duf3999 family protein | TH61_RS03830 | Not Available | Positive | 916618 - 917895 | 48903.2 |
| vps10 domain-containing protein | TH61_RS03835 | Not Available | Positive | 918027 - 921221 | 118538.0 |
| rdd family protein | TH61_RS03840 | Not Available | Positive | 921428 - 921910 | 17504.3 |
| large-conductance mechanosensitive channel protein mscl | TH61_RS03845 | Not Available | Positive | 921962 - 922390 | 15445.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | TH61_RS03850 | Not Available | Negative | 922683 - 923765 | 40926.4 |
| thioesterase family protein | TH61_RS03855 | Not Available | Negative | 923787 - 924215 | 15834.0 |
| ld-carboxypeptidase | TH61_RS03860 | Not Available | Positive | 924394 - 925302 | 33005.6 |
| m28 family peptidase | TH61_RS03865 | Not Available | Negative | 925379 - 926386 | 36581.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
