Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter sp. DG15C |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1054754 bp
Thymine Count
1049990 bp
Guanine Count
1019561 bp
Cytosine Count
1019433 bp
Genome Length
4143738 bp
Protein-coding Genes
3485 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | TH61_RS01845 | Not Available | Positive | 422570 - 423508 | 33507.9 |
| nfed family protein | TH61_RS01850 | Not Available | Positive | 423716 - 424186 | 17323.2 |
| spfh domain-containing protein | TH61_RS01855 | Not Available | Positive | 424252 - 425154 | 33461.1 |
| rhomboid family intramembrane serine protease | TH61_RS01860 | Not Available | Negative | 425287 - 426213 | 33955.6 |
| rhomboid family intramembrane serine protease | TH61_RS01865 | Not Available | Negative | 426217 - 426999 | 29763.9 |
| dna mismatch repair endonuclease mutl | TH61_RS01870 | Not Available | Negative | 427023 - 428864 | 68430.3 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | TH61_RS01875 | Not Available | Positive | 429248 - 432199 | 108965.0 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | TH61_RS01885 | Not Available | Positive | 432726 - 433865 | 42170.5 |
| hypothetical protein | TH61_RS01890 | Not Available | Positive | 433976 - 434356 | 13880.5 |
| nudix hydrolase | TH61_RS01895 | Not Available | Positive | 434432 - 435001 | 21399.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
