Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter sp. DG15C |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1054754 bp
Thymine Count
1049990 bp
Guanine Count
1019561 bp
Cytosine Count
1019433 bp
Genome Length
4143738 bp
Protein-coding Genes
3485 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wbqc family protein | TH61_RS01655 | Not Available | Positive | 378328 - 378933 | 23734.6 |
| atp-dependent clp protease atp-binding subunit | TH61_RS01660 | Not Available | Positive | 379041 - 381641 | 96474.7 |
| acyl-coa carboxylase subunit beta | TH61_RS01665 | Not Available | Positive | 381873 - 383435 | 56496.8 |
| m42 family metallopeptidase | TH61_RS01670 | Not Available | Positive | 383514 - 384584 | 39979.6 |
| gnat family n-acetyltransferase | TH61_RS01675 | Not Available | Positive | 384706 - 385272 | 22212.2 |
| abc transporter substrate-binding protein | TH61_RS01680 | Not Available | Positive | 385436 - 386206 | 28961.4 |
| duf4142 domain-containing protein | TH61_RS01685 | Not Available | Negative | 386290 - 386832 | 19928.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | TH61_RS01690 | Not Available | Negative | 387345 - 388583 | 44692.7 |
| 3-dehydroquinate synthase | TH61_RS01695 | Not Available | Negative | 388580 - 389620 | 38935.2 |
| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type ii | TH61_RS01700 | Not Available | Negative | 389685 - 390770 | 41058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
