Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter sp. DG15C |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1054754 bp
Thymine Count
1049990 bp
Guanine Count
1019561 bp
Cytosine Count
1019433 bp
Genome Length
4143738 bp
Protein-coding Genes
3485 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator | TH61_RS01115 | Not Available | Negative | 251522 - 251992 | 18154.8 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | TH61_RS01120 | Not Available | Negative | 252188 - 254392 | 84175.4 |
| Trna-leu | Not Available | Not Available | Positive | 254548 - 254629 | Not Available |
| trigger factor | TH61_RS01130 | Not Available | Positive | 254707 - 256032 | 50603.4 |
| clpp family protease | TH61_RS01135 | Not Available | Positive | 256339 - 257037 | 25926.2 |
| atp-dependent clp protease atp-binding subunit clpx | TH61_RS01140 | Not Available | Positive | 257308 - 258534 | 45564.3 |
| lipid-a-disaccharide synthase | TH61_RS01145 | Not Available | Negative | 258653 - 259765 | 42407.2 |
| 6-carboxytetrahydropterin synthase | TH61_RS01150 | Not Available | Negative | 259881 - 260297 | 15899.3 |
| iron abc transporter permease | TH61_RS01155 | Not Available | Negative | 260297 - 261304 | 36424.9 |
| abc transporter substrate-binding protein | TH61_RS01160 | Not Available | Negative | 261301 - 262209 | 33983.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
