Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter sp. DG15C |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rufibacter sp. DG15C
Accession NumberNZ_CP010776.1
Gene Summary
Adenine Count
1054754 bp
Thymine Count
1049990 bp
Guanine Count
1019561 bp
Cytosine Count
1019433 bp
Genome Length
4143738 bp
Protein-coding Genes
3485 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m1 family metallopeptidase | TH61_RS00055 | Not Available | + | 11158 - 13032 | 70972.0 |
| fatty acid desaturase | TH61_RS00060 | Not Available | - | 13176 - 13889 | 27682.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | TH61_RS00065 | Not Available | - | 14023 - 14868 | 31973.1 |
| lycopene cyclase domain-containing protein | TH61_RS00070 | Not Available | - | 14872 - 15582 | 27629.4 |
| hypothetical protein | TH61_RS00075 | Not Available | - | 15579 - 16112 | 20372.9 |
| phytoene/squalene synthase family protein | TH61_RS00080 | Not Available | - | 16120 - 16965 | 32557.2 |
| nad(p)/fad-dependent oxidoreductase | TH61_RS00085 | Not Available | - | 16969 - 18480 | 56431.8 |
| rna polymerase sigma factor | TH61_RS00090 | Not Available | - | 18521 - 19036 | 19795.7 |
| merr family transcriptional regulator | TH61_RS00095 | Not Available | - | 19194 - 20087 | 34356.9 |
| sterol desaturase family protein | TH61_RS00100 | Not Available | - | 20117 - 20566 | 17456.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.