Pantoea sp. GL120224-02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. GL120224-02 is characterized by the presence of flagella, which suggests that it is motile. Motility can play a significant role in the ecological interactions of this bacterium, allowing it to navigate its environment effectively. The strain has a single replicon, indicating a straightforward genomic organization that may facilitate efficient replication and gene expression. The genomic data for Pantoea sp. GL120224-02 is accessible under the accession number OBEC00000000.1, providing a resource for further research into its genetic and functional characteristics. The genus Pantoea is known for its diverse metabolic capabilities, which can include the degradation of various organic compounds and involvement in plant-associated environments. Given these traits, Pantoea sp. GL120224-02 may have significant ecological roles, potentially participating in nutrient cycling or plant interactions. The presence of flagella supports the idea that this strain can actively move toward environmental niches that are favorable for growth, such as those enriched with organic materials or in close proximity to plant roots. Understanding these traits can provide insights into the ecological roles of Pantoea species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. GL120224-02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. GL120224-02 genome assembly, contig:

Gene Summary

Adenine Count

1181505 bp

Thymine Count

1177920 bp

Guanine Count

1387236 bp

Cytosine Count

1371801 bp

Genome Length

5118812 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN02744778_03788Not AvailablePositive3973794 - 397421615201.1
glycine/d-amino acid oxidaseSAMN02744778_03789Not AvailablePositive3974233 - 397552845934.5
3-isopropylmalate dehydratase, large subunitSAMN02744778_03790Not AvailablePositive3975676 - 397709751249.3
3-isopropylmalate dehydratase, small subunitSAMN02744778_03791Not AvailablePositive3977099 - 397772522992.3
haloacetate dehalogenaseSAMN02744778_03792Not AvailablePositive3977722 - 397863633604.1
dna-binding transcriptional regulator, lysr familySAMN02744778_03793Not AvailablePositive3978667 - 397962635844.9
protein of unknown functionSAMN02744778_03794Not AvailableNegative3979652 - 397995710967.1
kup system potassium uptake proteinSAMN02744778_03795Not AvailableNegative3980237 - 398210567720.7
thioester reductase domain-containing proteinSAMN02744778_03796Not AvailablePositive3982461 - 398357040526.9
d-methionine transport system substrate-binding proteinSAMN02744778_03797Not AvailableNegative3983616 - 398441629218.9

Displaying genes 3751 – 3760 of 4878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.