Pantoea sp. GL120224-02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. GL120224-02 is characterized by the presence of flagella, which suggests that it is motile. Motility can play a significant role in the ecological interactions of this bacterium, allowing it to navigate its environment effectively. The strain has a single replicon, indicating a straightforward genomic organization that may facilitate efficient replication and gene expression. The genomic data for Pantoea sp. GL120224-02 is accessible under the accession number OBEC00000000.1, providing a resource for further research into its genetic and functional characteristics. The genus Pantoea is known for its diverse metabolic capabilities, which can include the degradation of various organic compounds and involvement in plant-associated environments. Given these traits, Pantoea sp. GL120224-02 may have significant ecological roles, potentially participating in nutrient cycling or plant interactions. The presence of flagella supports the idea that this strain can actively move toward environmental niches that are favorable for growth, such as those enriched with organic materials or in close proximity to plant roots. Understanding these traits can provide insights into the ecological roles of Pantoea species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. GL120224-02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. GL120224-02 genome assembly, contig:

Gene Summary

Adenine Count

1181505 bp

Thymine Count

1177920 bp

Guanine Count

1387236 bp

Cytosine Count

1371801 bp

Genome Length

5118812 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
monofunctional biosynthetic peptidoglycan transglycosylaseSAMN02744778_02276Not AvailablePositive2408333 - 240905527133.0
hpr-like nitrogen-regulatory protein nprSAMN02744778_02277Not AvailableNegative2409062 - 24093349727.68
upf0042 nucleotide-binding proteinSAMN02744778_02278Not AvailableNegative2409331 - 241018532485.9
pts iia-like nitrogen-regulatory protein ptsnSAMN02744778_02279Not AvailableNegative2410238 - 241072317729.4
putative sigma-54 modulation proteinSAMN02744778_02280Not AvailableNegative2410883 - 241117010860.1
rna polymerase, sigma 54 subunit, rpon/siglSAMN02744778_02281Not AvailableNegative2411192 - 241262553842.8
lipopolysaccharide export system atp-binding proteinSAMN02744778_02282Not AvailableNegative2412674 - 241339926857.5
lipopolysaccharide export system protein lptaSAMN02744778_02283Not AvailableNegative2413405 - 241395919755.6
lipopolysaccharide export system protein lptcSAMN02744778_02284Not AvailableNegative2413928 - 241450621773.7
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN02744778_02285Not AvailableNegative2414503 - 241506920473.8

Displaying genes 2291 – 2300 of 4878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.