Pantoea sp. GL120224-02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. GL120224-02 is characterized by the presence of flagella, which suggests that it is motile. Motility can play a significant role in the ecological interactions of this bacterium, allowing it to navigate its environment effectively. The strain has a single replicon, indicating a straightforward genomic organization that may facilitate efficient replication and gene expression. The genomic data for Pantoea sp. GL120224-02 is accessible under the accession number OBEC00000000.1, providing a resource for further research into its genetic and functional characteristics. The genus Pantoea is known for its diverse metabolic capabilities, which can include the degradation of various organic compounds and involvement in plant-associated environments. Given these traits, Pantoea sp. GL120224-02 may have significant ecological roles, potentially participating in nutrient cycling or plant interactions. The presence of flagella supports the idea that this strain can actively move toward environmental niches that are favorable for growth, such as those enriched with organic materials or in close proximity to plant roots. Understanding these traits can provide insights into the ecological roles of Pantoea species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. GL120224-02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. GL120224-02 genome assembly, contig:

Gene Summary

Adenine Count

1181505 bp

Thymine Count

1177920 bp

Guanine Count

1387236 bp

Cytosine Count

1371801 bp

Genome Length

5118812 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna processing protein rimmSAMN02744778_01886Not AvailableNegative1989140 - 198968820378.3
ssu ribosomal protein s16pSAMN02744778_01887Not AvailableNegative1989707 - 19899559190.11
signal recognition particle subunit ffh/srp54 (srp54)SAMN02744778_01888Not AvailableNegative1990098 - 199145949824.4
abc-type uncharacterized transport system, permease componentSAMN02744778_01889Not AvailablePositive1991626 - 199242029498.2
mg2+ and co2+ transporter corb, contains duf21, cbs pair, and corc-hlyc domainsSAMN02744778_01890Not AvailablePositive1992434 - 199372047936.9
s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxsSAMN02744778_01891Not AvailableNegative1993776 - 199429119265.2
glutamate-cysteine ligaseSAMN02744778_01893Not AvailableNegative1994442 - 199604659584.4
membrane protein yqaa, snare-associated domainSAMN02744778_01894Not AvailableNegative1996078 - 199650615371.2
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/beta-phosphoglucomutase family hydrolaseSAMN02744778_01895Not AvailableNegative1996503 - 199706921045.2
Trna-argNot AvailableNot AvailablePositive1997303 - 1997379Not Available

Displaying genes 1911 – 1920 of 4878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.