Rhizobium sp. UGM030330-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. UGM030330-04 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility in various environments. This species possesses a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in various biological processes. The accession number for Rhizobium sp. UGM030330-04 is QKML00000000.1, which provides a reference point for genetic and genomic studies. As a member of the genus Rhizobium, this bacterium is known for its symbiotic relationships with leguminous plants, where it forms root nodules and facilitates nitrogen fixation. This ecological role is significant, as it enhances soil fertility and supports plant growth, particularly in nitrogen-poor environments. The presence of flagella suggests that Rhizobium sp. UGM030330-04 is capable of active movement, which may aid in its colonization of plant roots and enhance its symbiotic efficiency. Overall, the traits of this bacterium highlight its potential importance in agricultural practices, particularly in sustainable farming systems that rely on natural nitrogen fixation to reduce the need for synthetic fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. UGM030330-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. UGM030330-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. UGM030330-04 N434DRAFT_scaffold00057.57, whole

Gene Summary

Adenine Count

1065538 bp

Thymine Count

1070407 bp

Guanine Count

1594978 bp

Cytosine Count

1587642 bp

Genome Length

5318565 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anti-sigma factor rsiwN434_04196Not AvailableNegative4468301 - 446908928771.0
rna polymerase sigma-70 factor (ecf subfamily)N434_04197Not AvailableNegative4469086 - 446956518085.9
putative lipoprotein with yx(fwy)xxd motifN434_04198Not AvailableNegative4469627 - 447000113440.2
arsr family transcriptional regulatorN434_04199Not AvailablePositive4470151 - 447051013609.3
uncharacterized protein yndb with ahsa1/start domainN434_04200Not AvailablePositive4470507 - 447098918330.6
putative membrane proteinN434_04201Not AvailableNegative4470996 - 447147817576.0
uncharacterized protein ybjt (duf2867 family)N434_04202Not AvailableNegative4471478 - 447277345048.6
exodeoxyribonuclease-5N434_04203Not AvailablePositive4472889 - 447401642076.1
transcriptional regulatorN434_04204Not AvailableNegative4474096 - 447477925067.1
pyridoxine 5'-phosphate synthaseN434_04205Not AvailablePositive4475027 - 447578227142.3

Displaying genes 4181 – 4190 of 4966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.