Rhizobium sp. UGM030330-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. UGM030330-04 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility in various environments. This species possesses a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in various biological processes. The accession number for Rhizobium sp. UGM030330-04 is QKML00000000.1, which provides a reference point for genetic and genomic studies. As a member of the genus Rhizobium, this bacterium is known for its symbiotic relationships with leguminous plants, where it forms root nodules and facilitates nitrogen fixation. This ecological role is significant, as it enhances soil fertility and supports plant growth, particularly in nitrogen-poor environments. The presence of flagella suggests that Rhizobium sp. UGM030330-04 is capable of active movement, which may aid in its colonization of plant roots and enhance its symbiotic efficiency. Overall, the traits of this bacterium highlight its potential importance in agricultural practices, particularly in sustainable farming systems that rely on natural nitrogen fixation to reduce the need for synthetic fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. UGM030330-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. UGM030330-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. UGM030330-04 N434DRAFT_scaffold00057.57, whole

Gene Summary

Adenine Count

1065538 bp

Thymine Count

1070407 bp

Guanine Count

1594978 bp

Cytosine Count

1587642 bp

Genome Length

5318565 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
threonine/homoserine/homoserine lactone efflux proteinN434_04115Not AvailableNegative4381247 - 438188222502.7
pyrophosphate-dependent phosphofructokinaseN434_04116Not AvailableNegative4381935 - 438314643319.6
dnaj like chaperone proteinN434_04117Not AvailablePositive4383466 - 438421827769.3
n-acetylmuramoyl-l-alanine amidaseN434_04118Not AvailablePositive4384215 - 438499428313.5
transglycosylase-like protein with slt domainN434_04119Not AvailablePositive4385281 - 438578118092.9
glycine/d-amino acid oxidase-like deaminating enzymeN434_04120Not AvailablePositive4385933 - 438712041630.4
glycine/d-amino acid oxidase-like deaminating enzymeN434_04121Not AvailablePositive4387181 - 438837142293.2
hxlr family transcriptional regulatorN434_04123Not AvailableNegative4388888 - 438931915865.2
short-subunit dehydrogenaseN434_04124Not AvailablePositive4389409 - 439022429645.7
nadph:quinone reductase-like zn-dependent oxidoreductaseN434_04125Not AvailablePositive4390275 - 439127636444.6

Displaying genes 4101 – 4110 of 4966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.